Literature DB >> 30118217

Biosynthesis of the Thiopeptins and Identification of an F420H2-Dependent Dehydropiperidine Reductase.

Hiro Ichikawa1, Ghader Bashiri2, Wendy L Kelly1.   

Abstract

Thiopeptins are highly decorated thiopeptide antibiotics similar in structure to thiostrepton A and harbor two unusual features. All thiopeptins contain a thioamide, a rare moiety among natural products, and a subset of thiopeptins present with a piperidine in the core macrocycle rather than the more oxidated dehydropiperidine or pyridine rings typically observed in the thiopeptides. Here, we report the identification of the thiopeptin biosynthetic gene ( tpn) cluster in Streptomyces tateyamensis and the gene product, TpnL, which shows sequence similarity to (deaza)flavin-dependent oxidoreductases. Heterologous expression of TpnL in the thiostrepton A producer Streptomyces laurentii led to the production of a piperidine-containing analogue. Binding studies revealed that TpnL preferentially binds the deazaflavin cofactor coenzyme F420, and in vitro reconstitution of TpnL activity confirmed that this enzyme is an F420H2-dependent dehydropiperidine reductase. The identification of TpnL and its activity establishes the basis for the piperidine-containing series a thiopeptides, one of the five main structural groups of this diverse family of antibiotics.

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Year:  2018        PMID: 30118217      PMCID: PMC6193465          DOI: 10.1021/jacs.8b04238

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  46 in total

1.  Sch 40832: a novel thiostrepton from Micromonospora carbonacea.

Authors:  M S Puar; T M Chan; V Hegde; M Patel; P Bartner; K J Ng; B N Pramanik; R D MacFarlane
Journal:  J Antibiot (Tokyo)       Date:  1998-02       Impact factor: 2.649

2.  Uncovering the enzymes that catalyze the final steps in oxytetracycline biosynthesis.

Authors:  Peng Wang; Ghader Bashiri; Xue Gao; Michael R Sawaya; Yi Tang
Journal:  J Am Chem Soc       Date:  2013-05-01       Impact factor: 15.419

3.  Thiopeptin, a new feed additive antibiotic: microbiological and chemical studies.

Authors:  N Miyairi; T Miyoshi; H Aoki; M Kosaka; H Ikushima
Journal:  Antimicrob Agents Chemother       Date:  1972-03       Impact factor: 5.191

4.  Synthesis and antibacterial activity of novel water-soluble nocathiacin analogs.

Authors:  Libo Xu; Amy K Farthing; James F Dropinski; Peter T Meinke; Christine McCallum; Emily Hickey; Kun Liu
Journal:  Bioorg Med Chem Lett       Date:  2012-10-23       Impact factor: 2.823

5.  An α/β-hydrolase fold protein in the biosynthesis of thiostrepton exhibits a dual activity for endopeptidyl hydrolysis and epoxide ring opening/macrocyclization.

Authors:  Qingfei Zheng; Shoufeng Wang; Panpan Duan; Rijing Liao; Dandan Chen; Wen Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2016-11-23       Impact factor: 11.205

6.  Saturation mutagenesis of TsrA Ala4 unveils a highly mutable residue of thiostrepton A.

Authors:  Feifei Zhang; Wendy L Kelly
Journal:  ACS Chem Biol       Date:  2015-01-20       Impact factor: 5.100

7.  Biosynthesis of F0, precursor of the F420 cofactor, requires a unique two radical-SAM domain enzyme and tyrosine as substrate.

Authors:  Laure Decamps; Benjamin Philmus; Alhosna Benjdia; Robert White; Tadhg P Begley; Olivier Berteau
Journal:  J Am Chem Soc       Date:  2012-10-24       Impact factor: 15.419

8.  Rv2074 is a novel F420 H2 -dependent biliverdin reductase in Mycobacterium tuberculosis.

Authors:  F Hafna Ahmed; A Elaaf Mohamed; Paul D Carr; Brendon M Lee; Karmen Condic-Jurkic; Megan L O'Mara; Colin J Jackson
Journal:  Protein Sci       Date:  2016-07-17       Impact factor: 6.725

9.  Structure of Ddn, the deazaflavin-dependent nitroreductase from Mycobacterium tuberculosis involved in bioreductive activation of PA-824.

Authors:  Susan E Cellitti; Jennifer Shaffer; David H Jones; Tathagata Mukherjee; Meera Gurumurthy; Badry Bursulaya; Helena I Boshoff; Inhee Choi; Amit Nayyar; Yong Sok Lee; Joseph Cherian; Pornwaratt Niyomrattanakit; Thomas Dick; Ujjini H Manjunatha; Clifton E Barry; Glen Spraggon; Bernhard H Geierstanger
Journal:  Structure       Date:  2012-01-11       Impact factor: 5.006

10.  Complete Genome Sequence of Thiostrepton-Producing Streptomyces laurentii ATCC 31255.

Authors:  Katsumi Doi; Yasuhiro Fujino; Yuko Nagayoshi; Toshihisa Ohshima; Seiya Ogata
Journal:  Genome Announc       Date:  2016-06-02
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  7 in total

1.  Interception of the Bycroft-Gowland Intermediate in the Enzymatic Macrocyclization of Thiopeptides.

Authors:  Jonathan W Bogart; Nicholas J Kramer; Aneta Turlik; Rachel M Bleich; Daniel S Catlin; Frank C Schroeder; Satish K Nair; R Thomas Williamson; K N Houk; Albert A Bowers
Journal:  J Am Chem Soc       Date:  2020-07-16       Impact factor: 15.419

2.  Cofactor F420: an expanded view of its distribution, biosynthesis and roles in bacteria and archaea.

Authors:  Rhys Grinter; Chris Greening
Journal:  FEMS Microbiol Rev       Date:  2021-09-08       Impact factor: 16.408

3.  Minimal lactazole scaffold for in vitro thiopeptide bioengineering.

Authors:  Alexander A Vinogradov; Morito Shimomura; Yuki Goto; Taro Ozaki; Shumpei Asamizu; Yoshinori Sugai; Hiroaki Suga; Hiroyasu Onaka
Journal:  Nat Commun       Date:  2020-05-08       Impact factor: 14.919

4.  A revised biosynthetic pathway for the cofactor F420 in prokaryotes.

Authors:  Ghader Bashiri; James Antoney; Ehab N M Jirgis; Mihir V Shah; Blair Ney; Janine Copp; Stephanie M Stuteley; Sreevalsan Sreebhavan; Brian Palmer; Martin Middleditch; Nobuhiko Tokuriki; Chris Greening; Colin Scott; Edward N Baker; Colin J Jackson
Journal:  Nat Commun       Date:  2019-04-05       Impact factor: 14.919

5.  Planomonospora: A Metabolomics Perspective on an Underexplored Actinobacteria Genus.

Authors:  Mitja M Zdouc; Marianna Iorio; Sonia I Maffioli; Max Crüsemann; Stefano Donadio; Margherita Sosio
Journal:  J Nat Prod       Date:  2021-01-26       Impact factor: 4.050

6.  Diversification by CofC and Control by CofD Govern Biosynthesis and Evolution of Coenzyme F420 and Its Derivative 3PG-F420.

Authors:  Mahmudul Hasan; Sabrina Schulze; Leona Berndt; Gottfried J Palm; Daniel Braga; Ingrid Richter; Daniel Last; Michael Lammers; Gerald Lackner
Journal:  mBio       Date:  2022-01-18       Impact factor: 7.867

7.  On the diversity of F420 -dependent oxidoreductases: A sequence- and structure-based classification.

Authors:  María Laura Mascotti; Maximiliano Juri Ayub; Marco W Fraaije
Journal:  Proteins       Date:  2021-07-16
  7 in total

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