| Literature DB >> 30112797 |
Jingjing Zhang1,2, Svetlana Markova2, Alejandro Garcia2, Kirk Huang2, Xingyu Nie2, Wookjin Choi2, Wei Lu2, Abraham Wu3, Andreas Rimner3, Guang Li2.
Abstract
PURPOSE: The purpose of this study was to evaluate the quality of automatically propagated contours of organs at risk (OARs) based on respiratory-correlated navigator-triggered four-dimensional magnetic resonance imaging (RC-4DMRI) for calculation of internal organ-at-risk volume (IRV) to account for intra-fractional OAR motion. METHODS AND MATERIALS: T2-weighted RC-4DMRI images were of 10 volunteers acquired and reconstructed using an internal navigator-echo surrogate and concurrent external bellows under an IRB-approved protocol. Four major OARs (lungs, heart, liver, and stomach) were delineated in the 10-phase 4DMRI. Two manual-contour sets were delineated by two clinical personnel and two automatic-contour sets were propagated using free-form deformable image registration. The OAR volume variation within the 10-phase cycle was assessed and the IRV was calculated as the union of all OAR contours. The OAR contour similarity between the navigator-triggered and bellows-rebinned 4DMRI was compared. A total of 2400 contours were compared to the most probable ground truth with a 95% confidence level (S95) in similarity, sensitivity, and specificity using the simultaneous truth and performance level estimation (STAPLE) algorithm.Entities:
Keywords: deformable image registration and automatic contour propagation; four-dimensional magnetic resonance imaging; normal tissue and organ contouring; respiratory-induced organ motion; treatment planning
Mesh:
Year: 2018 PMID: 30112797 PMCID: PMC6123161 DOI: 10.1002/acm2.12431
Source DB: PubMed Journal: J Appl Clin Med Phys ISSN: 1526-9914 Impact factor: 2.102
Figure 1A typical example (volunteer 5) of manual vs. automatic contours and intra‐ and inter‐observer variability in three volume‐conserving organs based on T2W RC‐4DMRI. The auto‐contour variation is smaller than inter‐observer variation (U1 = user1 and U2 = user2).
Evaluation of intra‐observer variability in manual contours of three volume‐conserving organs (heart, liver, and stomach) based on relative volume change within a breathing cycle
| Subject | Diaphragm motion (cm) | OAR motion, COM (cm) | Intra‐observer variability (volume variation, %V) | Inter‐observer variability (similarity variation, %S) | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Right | Left | Liver | Stomach | Heart | Liver | Stomach | Lungs | Heart | Liver | |
| 1 | 1.2 | 1.5 | – | – | 1.9 | – | – | 7.4 | −8.2 | – |
| 2 | 1.4 | 1.7 | 0.7 | 0.5 | 2.0 | 1.5 | 3.0 | 5.1 | −4.6 | 7.9 |
| 3 | 1.5 | 1.0 | 1.2 | 0.8 | 1.1 | 0.7 | 2.6 | 8.7 | 9.2 | 7.0 |
| 4 | 1.0 | 2.0 | 1.0 | 1.4 | 3.1 | 0.9 | 4.0 | 6.6 | −6.4 | 7.2 |
| 5 | 1.6 | 1.1 | 0.7 | 0.7 | 2.6 | 2.4 | 3.3 | 1.1 | 3.3 | −0.3 |
| 6 | 1.6 | 1.4 | 1.0 | 1.0 | 2.1 | 1.1 | 2.1 | 4.1 | 3.1 | 3.0 |
| 7 | 1.2 | 2.3 | 1.4 | 2.0 | 2.0 | 0.8 | 2.7 | 7.0 | −7.0 | 5.9 |
| 8 | 2.6 | 2.4 | 2.3 | 2.4 | 2.7 | 1.7 | 2.3 | 5.6 | 9.2 | 13.3 |
| 9 | 1.2 | 1.5 | 0.9 | 1.2 | 1.5 | 0.8 | 1.2 | – | 8.6 | 8.1 |
| 10 | 2.5 | 1.8 | 1.6 | 1.5 | 6.2 | 1.1 | 2.0 | 1.3 | −9.6 | 1.7 |
| Mean | 1.6 | 1.7 | 1.2 | 1.3 | 2.6 | 1.2 | 2.6 | 5.2 | −2.0 | 6.0 |
| SD | 0.6 | 0.5 | 0.5 | 0.6 | 1.5 | 0.6 | 0.8 | 2.6 | 7.1 | 4.1 |
Volunteers 1 and 9 have insufficient inferior and superior field of view, respectively.
The diaphragm motion range (or maximum displacement).
Organ at risk (OAR) motion refers to COM (center of mass) trajectory in the sup‐inf direction.
These OARs are considered volume‐conserving organs (%V = SD/mean × 100%).
Relative difference of averaged similarity (Jaccard index) [%S = 2∙(SU1‐SU2)/(SU1+SU2) × 100%]. The mean similarity values are >0.9 (See Table 2). U1 = User 1 and U2 = User 2.
Figure 2(a) Deformable image registration between full exhalation (blue) and full inhalation (red) of T2W navigator‐triggered 4DMRI (volunteer #7). Soft‐tissue alignment before and after DIR within a region of interest (orange box) makes aligned voxel (white), except for the flowing blood voxels inside the major vessels around the heart. (b) Comparison of four sets of manual and auto contours (user1: orange/green, user2: pink/brown) in the upper panel and with the most probable ground truth (S95, green area), generated by the STAPLE, in the lower panel.
Comparison of manual and automatic contours with the most probable ground truth (S95) contour based on their similarity (Jaccard Index), sensitivity, and specificity averaged from ten respiratory phases and two observers on four OARs. The manual and automatic contours are statistically indistinguishable
| STAPLE | Subject | Lungs (L+R) | Heart | Liver | Stomach | ||||
|---|---|---|---|---|---|---|---|---|---|
| Manual | Auto | Manual | Auto | Manual | Auto | Manual | Auto | ||
| Similarity | 1 | 0.91 | 0.91 | 0.89 | 0.88 | – | – | – | – |
| (Jaccard) | 2 | 0.92 | 0.90 | 0.91 | 0.92 | 0.89 | 0.90 | 0.84 | 0.83 |
| Index) | 3 | 0.91 | 0.91 | 0.93 | 0.86 | 0.91 | 0.91 | 0.85 | 0.81 |
| 4 | 0.94 | 0.91 | 0.88 | 0.87 | 0.92 | 0.91 | 0.85 | 0.83 | |
| 5 | 0.92 | 0.91 | 0.89 | 0.96 | 0.93 | 0.95 | 0.79 | 0.83 | |
| 6 | 0.93 | 0.94 | 0.92 | 0.90 | 0.92 | 0.93 | 0.76 | 0.78 | |
| 7 | 0.93 | 0.93 | 0.89 | 0.89 | 0.94 | 0.95 | 0.90 | 0.91 | |
| 8 | 0.93 | 0.94 | 0.89 | 0.91 | 0.87 | 0.89 | 0.78 | 0.75 | |
| 9 | – | – | 0.87 | 0.89 | 0.91 | 0.91 | 0.83 | 0.87 | |
| 10 | 0.92 | 0.92 | 0.87 | 0.84 | 0.91 | 0.91 | 0.83 | 0.82 | |
| Average | 0.92 | 0.92 | 0.89 | 0.89 | 0.91 | 0.92 | 0.82 | 0.83 | |
| SD | 0.02 | 0.01 | 0.02 | 0.04 | 0.02 | 0.02 | 0.04 | 0.04 | |
|
| 0.35 | 0.79 | 0.08 | 1.00 | |||||
| Sensitivity | 1 | 0.93 | 0.93 | 0.93 | 0.90 | – | – | – | – |
| 2 | 0.94 | 0.94 | 0.95 | 0.95 | 0.93 | 0.93 | 0.87 | 0.85 | |
| 3 | 0.93 | 0.94 | 0.96 | 0.96 | 0.93 | 0.93 | 0.91 | 0.87 | |
| 4 | 0.95 | 0.93 | 0.91 | 0.91 | 0.94 | 0.92 | 0.89 | 0.87 | |
| 5 | 0.94 | 0.93 | 0.94 | 0.97 | 0.94 | 0.96 | 0.83 | 0.85 | |
| 6 | 0.94 | 0.95 | 0.96 | 0.91 | 0.94 | 0.94 | 0.81 | 0.80 | |
| 7 | 0.95 | 0.95 | 0.92 | 0.91 | 0.95 | 0.96 | 0.94 | 0.93 | |
| 8 | 0.94 | 0.95 | 0.92 | 0.93 | 0.90 | 0.92 | 0.84 | 0.80 | |
| 9 | – | – | 0.92 | 0.92 | 0.93 | 0.93 | 0.88 | 0.90 | |
| 10 | 0.94 | 0.95 | 0.91 | 0.88 | 0.93 | 0.94 | 0.87 | 0.86 | |
| Average | 0.94 | 0.94 | 0.93 | 0.92 | 0.93 | 0.94 | 0.87 | 0.86 | |
| SD | 0.02 | 0.01 | 0.03 | 0.04 | 0.01 | 0.01 | 0.04 | 0.04 | |
|
| 0.76 | 0.44 | 0.31 | 0.13 | |||||
| Specificity | 1 | 0.98 | 0.97 | 0.95 | 0.97 | – | – | – | – |
| 2 | 0.94 | 0.94 | 0.98 | 0.97 | 0.93 | 0.93 | 0.96 | 0.97 | |
| 3 | 0.93 | 0.94 | 0.96 | 0.90 | 0.93 | 0.93 | 0.93 | 0.93 | |
| 4 | 0.98 | 0.98 | 0.97 | 0.96 | 0.98 | 0.98 | 0.95 | 0.94 | |
| 5 | 0.97 | 0.98 | 0.95 | 0.98 | 0.98 | 0.99 | 0.94 | 0.97 | |
| 6 | 0.99 | 0.98 | 0.96 | 0.99 | 0.98 | 0.98 | 0.93 | 0.97 | |
| 7 | 0.98 | 0.98 | 0.96 | 0.97 | 0.99 | 0.99 | 0.96 | 0.98 | |
| 8 | 0.98 | 0.97 | 0.97 | 0.98 | 0.97 | 0.96 | 0.91 | 0.93 | |
| 9 | – | – | 0.95 | 0.96 | 0.97 | 0.98 | 0.93 | 0.97 | |
| 10 | 0.98 | 0.97 | 0.95 | 0.96 | 0.97 | 0.97 | 0.94 | 0.95 | |
| Average | 0.98 | 0.97 | 0.96 | 0.96 | 0.97 | 0.97 | 0.94 | 0.96 | |
| SD | 0.03 | 0.02 | 0.03 | 0.04 | 0.02 | 0.02 | 0.02 | 0.02 | |
|
| 0.45 | 0.64 | 0.59 | 0.01 | |||||
STAPLE refers to the simultaneous truth and performance level estimation algorithm.
Volunteers 1 and 9 have an incomplete field of view in the inferior and superior, respectively.
The P < 0.05 indicates that the automatic contour is slightly better than the manual contour.
Figure 3Visual illustration of the internal organ at risk volume (IRV, color shaded) and individual organ at risk (OAR) contour volumes for volunteer #7 in full exhalation and inhalation phases: (a) heart, (b) liver, and (c) stomach. On average, the volume increase from the OAR volume to IRV is 20–50%, depending on the OAR motion, volume, and contour accuracy.
Figure 4Variation in heart and liver contour similarity based on the navigator‐triggered and bellows‐rebinned 4DMRI images. The similarity difference between manual and automatic contours (heart: P = 0.003 and 0.042 and liver: P = 0.001 and 0.001, respectively) in Navigator‐based and Bellows‐based 4DMRI is statistically significant.