Literature DB >> 3011112

Combined use of 1H-NMR and GC-MS for metabolite monitoring and in vivo 1H-NMR assignments.

T W Fan, R M Higashi, A N Lane, O Jardetzky.   

Abstract

Thirty-three metabolites were observed in perchloric acid extracts of four different tissues by in vitro 1H-NMR, GC-MS and alcohol dehydrogenase assay, and the information was used to interpret an in vivo two-dimensional nuclear Overhauser effect 1H-NMR spectrum. The metabolite profiles of the different tissues indicate a number of potential tissue-specific markers: N-acetylaspartate and gamma-aminobutyric acid for rat brain, glutamine/glutamic acid ratio for dog heart, arginine and sucrose for carrot, and t-aconitate, sucrose, asparagine/aspartic acid concentration ratios for corn roots. gamma-Aminobutyric acid and malate can be regarded as metabolic indicators for stressed corn roots. Concentrations of threonine and valine in corn roots were constant under hypoxic and salt stress, and can serve as internal standards for both in vivo and in vitro NMR studies. The in vitro information was further used to identify 12 compounds from the in vivo 1H-NMR spectra (including the two-dimensional nuclear Overhauser effect spectrum) of a carrot cylinder by correlating the chemical shift and nuclear Overhauser effect information. Thus, our choice of methods with a capability for structural determination allows the characterization of complex tissue extracts with minimum sample preparation, and supports, as well as complements, in vivo 1H-NMR investigations of metabolism.

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Year:  1986        PMID: 3011112     DOI: 10.1016/0304-4165(86)90150-9

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  24 in total

Review 1.  Stable isotope-resolved metabolomics and applications for drug development.

Authors:  Teresa W-M Fan; Pawel K Lorkiewicz; Katherine Sellers; Hunter N B Moseley; Richard M Higashi; Andrew N Lane
Journal:  Pharmacol Ther       Date:  2011-12-23       Impact factor: 12.310

2.  Brain development: 1H magnetic resonance spectroscopy of rat brain extracts compared with chromatographic methods.

Authors:  R Burri; P Bigler; P Straehl; S Posse; J P Colombo; N Herschkowitz
Journal:  Neurochem Res       Date:  1990-10       Impact factor: 3.996

Review 3.  NMR-based Stable Isotope Resolved Metabolomics in systems biochemistry.

Authors:  Andrew N Lane; Teresa W-M Fan
Journal:  Arch Biochem Biophys       Date:  2017-03-02       Impact factor: 4.013

Review 4.  N-Acetylaspartate in the CNS: from neurodiagnostics to neurobiology.

Authors:  John R Moffett; Brian Ross; Peethambaran Arun; Chikkathur N Madhavarao; Aryan M A Namboodiri
Journal:  Prog Neurobiol       Date:  2007-01-05       Impact factor: 11.685

Review 5.  Applications of NMR spectroscopy to systems biochemistry.

Authors:  Teresa W-M Fan; Andrew N Lane
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2016-02-06       Impact factor: 9.795

6.  Stable Isotope Resolved Metabolomics Analysis of Ribonucleotide and RNA Metabolism in Human Lung Cancer Cells.

Authors:  Teresa W-M Fan; Jinlian Tan; Martin M McKinney; Andrew N Lane
Journal:  Metabolomics       Date:  2012-06       Impact factor: 4.290

7.  Stable isotope resolved metabolomics of lung cancer in a SCID mouse model.

Authors:  Teresa W-M Fan; Andrew N Lane; Richard M Higashi; Jun Yan
Journal:  Metabolomics       Date:  2011-06-01       Impact factor: 4.290

8.  Metabolomic investigations of American oysters using H-NMR spectroscopy.

Authors:  Andrey P Tikunov; Christopher B Johnson; Haakil Lee; Michael K Stoskopf; Jeffrey M Macdonald
Journal:  Mar Drugs       Date:  2010-10-08       Impact factor: 5.118

9.  Metabolic profiling identifies lung tumor responsiveness to erlotinib.

Authors:  Teresa W-M Fan; Andrew N Lane; Richard M Higashi; Michael Bousamra; Goetz Kloecker; Donald M Miller
Journal:  Exp Mol Pathol       Date:  2009-05-03       Impact factor: 3.362

Review 10.  Prospects for clinical cancer metabolomics using stable isotope tracers.

Authors:  Andrew N Lane; Teresa W-M Fan; Richard M Higashi; Jinlian Tan; Michael Bousamra; Donald M Miller
Journal:  Exp Mol Pathol       Date:  2009-01-20       Impact factor: 3.362

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