Literature DB >> 30108825

Identification of steroid-like natural products as antiplasmodial agents by 2D and 3D similarity-based virtual screening.

Elumalai Pavadai1, Gurminder Kaur1, Sergio Wittlin2,3, Kelly Chibale1,4,5.   

Abstract

The emergence of drug resistance in Plasmodium falciparum to available antimalarial drugs has challenged current antimalarial treatments. New antimalarials, particularly those with novel mechanisms of action and no cross resistance to current drugs, are therefore urgently needed. To identify new growth inhibitors of Plasmodium falciparum, 2D and 3D similarity-based virtual screening methods were employed in parallel with an in-house database of steroid-type natural products using fusidic acid as a search query. The resulting hit compounds were further filtered based on the predicted partition coefficient, log P. The virtual screening strategy resulted in the identification of nine new compounds that inhibited parasite growth with IC50 values of <20 μM. Four compounds exhibited IC50 values in the range of 1.39-3.45 μM and three of which showed a promising selectivity index. Further, the predicted ADME properties of the four most active compounds were found to be comparable to fusidic acid. These compounds can be further explored using structural modifications in the identification and development of more potent parasite growth inhibitors with improved selectivity.

Entities:  

Year:  2017        PMID: 30108825      PMCID: PMC6071788          DOI: 10.1039/c7md00063d

Source DB:  PubMed          Journal:  Medchemcomm        ISSN: 2040-2503            Impact factor:   3.597


  19 in total

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2.  Shape signatures: new descriptors for predicting cardiotoxicity in silico.

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Journal:  Chem Res Toxicol       Date:  2008-05-08       Impact factor: 3.739

Review 3.  Drug-resistant malaria: molecular mechanisms and implications for public health.

Authors:  Ines Petersen; Richard Eastman; Michael Lanzer
Journal:  FEBS Lett       Date:  2011-04-23       Impact factor: 4.124

4.  Identification of HIV-1 reverse transcriptase dual inhibitors by a combined shape-, 2D-fingerprint- and pharmacophore-based virtual screening approach.

Authors:  Simona Distinto; Francesca Esposito; Johannes Kirchmair; M Cristina Cardia; Marco Gaspari; Elias Maccioni; Stefano Alcaro; Patrick Markt; Gerhard Wolber; Luca Zinzula; Enzo Tramontano
Journal:  Eur J Med Chem       Date:  2012-02-05       Impact factor: 6.514

Review 5.  Virtual screening strategies in medicinal chemistry: the state of the art and current challenges.

Authors:  Rodolpho C Braga; Vinicius M Alves; Arthur C Silva; Marilia N Nascimento; Flavia C Silva; Luciano M Liao; Carolina H Andrade
Journal:  Curr Top Med Chem       Date:  2014       Impact factor: 3.295

Review 6.  Cucurbitacins and cucurbitane glycosides: structures and biological activities.

Authors:  Jian Chao Chen; Ming Hua Chiu; Rui Lin Nie; Geoffrey A Cordell; Samuel X Qiu
Journal:  Nat Prod Rep       Date:  2005-04-04       Impact factor: 13.423

7.  The mode of action of fusidic acid.

Authors:  E Cundliffe
Journal:  Biochem Biophys Res Commun       Date:  1972-03-10       Impact factor: 3.575

8.  Artemisinin resistance in Plasmodium falciparum malaria.

Authors:  Arjen M Dondorp; François Nosten; Poravuth Yi; Debashish Das; Aung Phae Phyo; Joel Tarning; Khin Maung Lwin; Frederic Ariey; Warunee Hanpithakpong; Sue J Lee; Pascal Ringwald; Kamolrat Silamut; Mallika Imwong; Kesinee Chotivanich; Pharath Lim; Trent Herdman; Sen Sam An; Shunmay Yeung; Pratap Singhasivanon; Nicholas P J Day; Niklas Lindegardh; Duong Socheat; Nicholas J White
Journal:  N Engl J Med       Date:  2009-07-30       Impact factor: 91.245

9.  Characterization of two malaria parasite organelle translation elongation factor G proteins: the likely targets of the anti-malarial fusidic acid.

Authors:  Russell A Johnson; Geoffrey I McFadden; Christopher D Goodman
Journal:  PLoS One       Date:  2011-06-10       Impact factor: 3.240

10.  Combination of 2D/3D ligand-based similarity search in rapid virtual screening from multimillion compound repositories. Selection and biological evaluation of potential PDE4 and PDE5 inhibitors.

Authors:  Krisztina Dobi; István Hajdú; Beáta Flachner; Gabriella Fabó; Mária Szaszkó; Melinda Bognár; Csaba Magyar; István Simon; Dániel Szisz; Zsolt Lőrincz; Sándor Cseh; György Dormán
Journal:  Molecules       Date:  2014-05-28       Impact factor: 4.411

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  3 in total

1.  A novel biomimetic nanomedicine system with anti-inflammatory and anti-osteoporosis effects improves the therapy efficacy of steroid-resistant nephrotic syndrome.

Authors:  Jian Li; Mingyi Zhao; Xinying Xiang; Qingnan He; Rong Gui
Journal:  J Nanobiotechnology       Date:  2021-12-13       Impact factor: 10.435

2.  AMTDB: A comprehensive database of autophagic modulators for anti-tumor drug discovery.

Authors:  Jiahui Fu; Lifeng Wu; Gaoyong Hu; Qiqi Shi; Ruodi Wang; Lingjuan Zhu; Haiyang Yu; Leilei Fu
Journal:  Front Pharmacol       Date:  2022-08-09       Impact factor: 5.988

3.  Maximizing the Performance of Similarity-Based Virtual Screening Methods by Generating Synergy from the Integration of 2D and 3D Approaches.

Authors:  Ningning Fan; Steffen Hirte; Johannes Kirchmair
Journal:  Int J Mol Sci       Date:  2022-07-13       Impact factor: 6.208

  3 in total

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