Literature DB >> 30107597

Voxel-wise radiogenomic mapping of tumor location with key molecular alterations in patients with glioma.

Miguel Angel Tejada Neyra1, Ulf Neuberger1, Annekathrin Reinhardt2, Gianluca Brugnara1, David Bonekamp3, Martin Sill4,5,6, Antje Wick7, David T W Jones4,5,6, Alexander Radbruch3, Andreas Unterberg8, Jürgen Debus9,10, Sabine Heiland1, Heinz-Peter Schlemmer3, Christel Herold-Mende8, Stefan Pfister4,5,6,11, Andreas von Deimling2,12, Wolfgang Wick7,13, David Capper2,14,15, Martin Bendszus1, Philipp Kickingereder1.   

Abstract

Background: This study aims to evaluate the impact of tumor location on key molecular alterations on a single voxel level in patients with newly diagnosed glioma.
Methods: A consecutive series of n = 237 patients with newly diagnosed glioblastoma and n = 131 patients with lower-grade glioma was analyzed. Volumetric tumor segmentation was performed on preoperative MRI with a semi-automated approach and images were registered to the standard Montreal Neurological Institute 152 space. Using a voxel-based lesion symptom mapping (VLSM) analysis, we identified specific brain regions that were associated with tumor-specific molecular alterations. We assessed a predefined set of n = 17 molecular characteristics in the glioblastoma cohort and n = 2 molecular characteristics in the lower-grade glioma cohort. Permutation adjustment (n = 1000 iterations) was used to correct for multiple testing, and voxel t-values that were greater than the t-value in >95% of the permutations were retained in the VLSM results (α = 0.05, power > 0.8).
Results: Tumor location predilection for isocitrate dehydrogenase (IDH) mutant tumors was found in both glioblastoma and lower-grade glioma cohorts, each showing a concordant predominance in the frontal lobe adjacent to the rostral extension of the lateral ventricles (permutation-adjusted P = 0.021 for the glioblastoma and 0.013 for the lower-grade glioma cohort). Apart from that, the VLSM analysis did not reveal a significant association of the tumor location with any other key molecular alteration in both cohorts (permutation-adjusted P > 0.05 each).
Conclusion: Our study highlights the unique properties of IDH mutations and underpins the hypothesis that the rostral extension of the lateral ventricles is a potential location for the cell of origin in IDH-mutant gliomas.

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Year:  2018        PMID: 30107597      PMCID: PMC6176804          DOI: 10.1093/neuonc/noy134

Source DB:  PubMed          Journal:  Neuro Oncol        ISSN: 1522-8517            Impact factor:   12.300


  44 in total

1.  Voxel-based lesion-symptom mapping.

Authors:  Elizabeth Bates; Stephen M Wilson; Ayse Pinar Saygin; Frederic Dick; Martin I Sereno; Robert T Knight; Nina F Dronkers
Journal:  Nat Neurosci       Date:  2003-05       Impact factor: 24.884

2.  Evolution of DNA repair defects during malignant progression of low-grade gliomas after temozolomide treatment.

Authors:  Hinke F van Thuijl; Tali Mazor; Brett E Johnson; Shaun D Fouse; Koki Aihara; Chibo Hong; Annika Malmström; Martin Hallbeck; Jan J Heimans; Jenneke J Kloezeman; Marie Stenmark-Askmalm; Martine L M Lamfers; Nobuhito Saito; Hiroyuki Aburatani; Akitake Mukasa; Mitchell S Berger; Peter Söderkvist; Barry S Taylor; Annette M Molinaro; Pieter Wesseling; Jaap C Reijneveld; Susan M Chang; Bauke Ylstra; Joseph F Costello
Journal:  Acta Neuropathol       Date:  2015-02-28       Impact factor: 17.088

3.  Power in Voxel-based lesion-symptom mapping.

Authors:  Daniel Y Kimberg; H Branch Coslett; Myrna F Schwartz
Journal:  J Cogn Neurosci       Date:  2007-07       Impact factor: 3.225

4.  MGMT methylation analysis of glioblastoma on the Infinium methylation BeadChip identifies two distinct CpG regions associated with gene silencing and outcome, yielding a prediction model for comparisons across datasets, tumor grades, and CIMP-status.

Authors:  Pierre Bady; Davide Sciuscio; Annie-Claire Diserens; Jocelyne Bloch; Martin J van den Bent; Christine Marosi; Pierre-Yves Dietrich; Michael Weller; Luigi Mariani; Frank L Heppner; David R Mcdonald; Denis Lacombe; Roger Stupp; Mauro Delorenzi; Monika E Hegi
Journal:  Acta Neuropathol       Date:  2012-07-19       Impact factor: 17.088

5.  Probabilistic radiographic atlas of glioblastoma phenotypes.

Authors:  B M Ellingson; A Lai; R J Harris; J M Selfridge; W H Yong; K Das; W B Pope; P L Nghiemphu; H V Vinters; L M Liau; P S Mischel; T F Cloughesy
Journal:  AJNR Am J Neuroradiol       Date:  2012-09-20       Impact factor: 3.825

6.  Assessment of tumor oxygenation and its impact on treatment response in bevacizumab-treated recurrent glioblastoma.

Authors:  David Bonekamp; Kim Mouridsen; Alexander Radbruch; Felix T Kurz; Oliver Eidel; Antje Wick; Heinz-Peter Schlemmer; Wolfgang Wick; Martin Bendszus; Leif Østergaard; Philipp Kickingereder
Journal:  J Cereb Blood Flow Metab       Date:  2016-07-21       Impact factor: 6.200

7.  ATRX loss refines the classification of anaplastic gliomas and identifies a subgroup of IDH mutant astrocytic tumors with better prognosis.

Authors:  Benedikt Wiestler; David Capper; Tim Holland-Letz; Andrey Korshunov; Andreas von Deimling; Stefan Michael Pfister; Michael Platten; Michael Weller; Wolfgang Wick
Journal:  Acta Neuropathol       Date:  2013-08-01       Impact factor: 17.088

Review 8.  Cells of origin in cancer.

Authors:  Jane E Visvader
Journal:  Nature       Date:  2011-01-20       Impact factor: 49.962

Review 9.  Origin of Gliomas.

Authors:  Daniel Cahill; Sevin Turcan
Journal:  Semin Neurol       Date:  2018-03-16       Impact factor: 3.420

10.  Combinations of genetic mutations in the adult neural stem cell compartment determine brain tumour phenotypes.

Authors:  Thomas S Jacques; Alexander Swales; Monika J Brzozowski; Nico V Henriquez; Jacqueline M Linehan; Zaman Mirzadeh; Catherine O' Malley; Heike Naumann; Arturo Alvarez-Buylla; Sebastian Brandner
Journal:  EMBO J       Date:  2009-11-19       Impact factor: 11.598

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  13 in total

1.  The subventricular zone concept: ready for therapeutic implications?

Authors:  Gabriel C T Garcia; Frederic G Dhermain
Journal:  Neuro Oncol       Date:  2018-10-09       Impact factor: 12.300

2.  Fully automated hybrid approach to predict the IDH mutation status of gliomas via deep learning and radiomics.

Authors:  Yoon Seong Choi; Sohi Bae; Jong Hee Chang; Seok-Gu Kang; Se Hoon Kim; Jinna Kim; Tyler Hyungtaek Rim; Seung Hong Choi; Rajan Jain; Seung-Koo Lee
Journal:  Neuro Oncol       Date:  2021-02-25       Impact factor: 12.300

Review 3.  Imaging signatures of glioblastoma molecular characteristics: A radiogenomics review.

Authors:  Anahita Fathi Kazerooni; Spyridon Bakas; Hamidreza Saligheh Rad; Christos Davatzikos
Journal:  J Magn Reson Imaging       Date:  2019-08-27       Impact factor: 4.813

4.  Analysis of morphological characteristics of IDH-mutant/wildtype brain tumors using whole-lesion phenotype analysis.

Authors:  James M Snyder; Raymond Y Huang; Harrison Bai; Vikram R Rao; Susannah Cornes; Jill S Barnholtz-Sloan; David Gutman; Rebecca Fasano; Erwin G Van Meir; Daniel Brat; Jennifer Eschbacher; John Quackenbush; Patrick Y Wen; Jong Woo Lee
Journal:  Neurooncol Adv       Date:  2021-06-24

5.  Survival of glioblastoma in relation to tumor location: a statistical tumor atlas of a population-based cohort.

Authors:  Even Hovig Fyllingen; Lars Eirik Bø; Ingerid Reinertsen; Asgeir Store Jakola; Lisa Millgård Sagberg; Erik Magnus Berntsen; Øyvind Salvesen; Ole Solheim
Journal:  Acta Neurochir (Wien)       Date:  2021-03-20       Impact factor: 2.216

6.  T2/FLAIR-mismatch sign for noninvasive detection of IDH-mutant 1p/19q non-codeleted gliomas: validity and pathophysiology.

Authors:  Martha Foltyn; Karen Natalia Nieto Taborda; Ulf Neuberger; Gianluca Brugnara; Annekathrin Reinhardt; Damian Stichel; Sabine Heiland; Christel Herold-Mende; Andreas Unterberg; Jürgen Debus; Andreas von Deimling; Wolfgang Wick; Martin Bendszus; Philipp Kickingereder
Journal:  Neurooncol Adv       Date:  2020-01-10

Review 7.  Calcium Channels in Adult Brain Neural Stem Cells and in Glioblastoma Stem Cells.

Authors:  Valérie Coronas; Elodie Terrié; Nadine Déliot; Patricia Arnault; Bruno Constantin
Journal:  Front Cell Neurosci       Date:  2020-11-13       Impact factor: 5.505

8.  Introduction to radiomics and radiogenomics in neuro-oncology: implications and challenges.

Authors:  Niha Beig; Kaustav Bera; Pallavi Tiwari
Journal:  Neurooncol Adv       Date:  2021-01-23

9.  Differences in spatial distribution between WHO 2016 low-grade glioma molecular subgroups.

Authors:  Maarten M J Wijnenga; Sebastian R van der Voort; Pim J French; Stefan Klein; Hendrikus J Dubbink; Winand N M Dinjens; Peggy N Atmodimedjo; Marius de Groot; Johan M Kros; Joost W Schouten; Clemens M F Dirven; Arnaud J P E Vincent; Marion Smits; Martin J van den Bent
Journal:  Neurooncol Adv       Date:  2019-05-31

10.  Lower-Grade Gliomas: An Epidemiological Voxel-Based Analysis of Location and Proximity to Eloquent Regions.

Authors:  Tomás Gómez Vecchio; Alice Neimantaite; Alba Corell; Jiri Bartek; Margret Jensdottir; Ingerid Reinertsen; Ole Solheim; Asgeir S Jakola
Journal:  Front Oncol       Date:  2021-09-21       Impact factor: 6.244

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