Literature DB >> 30099321

The defective component of viral populations.

Veronica V Rezelj1, Laura I Levi1, Marco Vignuzzi2.   

Abstract

Particles containing degenerate forms of the viral genome which interfere with virus replication and are non-replicative per se are known as defective interfering particles (DIPs). DIPs are likely to be produced upon infection by any virus in vitro and in nature. Until recently, roles of these non-viable particles as members of a multi-component viral system have been overlooked. In this review, we cover the most recent studies that shed light on critical roles of DIPs during the course of infection, including: the modulation of virus replication, innate immune responses, disease outcome and virus persistence, as well as the evolution of the viral population. Together, these reports allow us to conceive a more complete picture of the virion population, and highlight the fact that DIPs are not a negligible subset of this population but instead can greatly influence the fate of infection.
Copyright © 2018 The Authors. Published by Elsevier B.V. All rights reserved.

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Mesh:

Year:  2018        PMID: 30099321     DOI: 10.1016/j.coviro.2018.07.014

Source DB:  PubMed          Journal:  Curr Opin Virol        ISSN: 1879-6257            Impact factor:   7.090


  28 in total

1.  Broad and Dynamic Diversification of Infectious Hepatitis C Virus in a Cell Culture Environment.

Authors:  Isabel Gallego; María Eugenia Soria; Carlos García-Crespo; Qian Chen; Patricia Martínez-Barragán; Soumaya Khalfaoui; Brenda Martínez-González; Irene Sanchez-Martin; Inés Palacios-Blanco; Ana Isabel de Ávila; Damir García-Cehic; Juan Ignacio Esteban; Jordi Gómez; Carlos Briones; Josep Gregori; Josep Quer; Celia Perales; Esteban Domingo
Journal:  J Virol       Date:  2020-02-28       Impact factor: 5.103

2.  Mixtures of Insect-Pathogenic Viruses in a Single Virion: towards the Development of Custom-Designed Insecticides.

Authors:  Inés Beperet; Oihane Simón; Miguel López-Ferber; Jan van Lent; Trevor Williams; Primitivo Caballero
Journal:  Appl Environ Microbiol       Date:  2021-01-15       Impact factor: 4.792

3.  Direct sequencing of RNA with MinION Nanopore: detecting mutations based on associations.

Authors:  Noam Harel; Moran Meir; Uri Gophna; Adi Stern
Journal:  Nucleic Acids Res       Date:  2019-12-16       Impact factor: 16.971

4.  Defective Viral Genomes Alter How Sendai Virus Interacts with Cellular Trafficking Machinery, Leading to Heterogeneity in the Production of Viral Particles among Infected Cells.

Authors:  Emmanuelle Genoyer; Carolina B López
Journal:  J Virol       Date:  2019-02-05       Impact factor: 5.103

5.  Polyamine Depletion Inhibits Bunyavirus Infection via Generation of Noninfectious Interfering Virions.

Authors:  Vincent Mastrodomenico; Jeremy J Esin; Marion L Graham; Patrick M Tate; Grant M Hawkins; Zachary J Sandler; David J Rademacher; Thomas M Kicmal; Courtney N Dial; Bryan C Mounce
Journal:  J Virol       Date:  2019-06-28       Impact factor: 5.103

6.  Reovirus RNA recombination is sequence directed and generates internally deleted defective genome segments during passage.

Authors:  Sydni Caet Smith; Jennifer Gribble; Julia R Diller; Michelle A Wiebe; Timothy W Thoner; Mark R Denison; Kristen M Ogden
Journal:  J Virol       Date:  2021-01-20       Impact factor: 5.103

7.  Neural networks enable efficient and accurate simulation-based inference of evolutionary parameters from adaptation dynamics.

Authors:  Grace Avecilla; Julie N Chuong; Fangfei Li; Gavin Sherlock; David Gresham; Yoav Ram
Journal:  PLoS Biol       Date:  2022-05-27       Impact factor: 9.593

Review 8.  Defective Interfering Particles of Negative-Strand RNA Viruses.

Authors:  Christopher M Ziegler; Jason W Botten
Journal:  Trends Microbiol       Date:  2020-03-26       Impact factor: 17.079

9.  Sequencing Framework for the Sensitive Detection and Precise Mapping of Defective Interfering Particle-Associated Deletions across Influenza A and B Viruses.

Authors:  Fadi G Alnaji; Jessica R Holmes; Gloria Rendon; J Cristobal Vera; Christopher J Fields; Brigitte E Martin; Christopher B Brooke
Journal:  J Virol       Date:  2019-05-15       Impact factor: 6.549

10.  Covariation of viral recombination with single nucleotide variants during virus evolution revealed by CoVaMa.

Authors:  Shiyi Wang; Stephanea L Sotcheff; Christian M Gallardo; Elizabeth Jaworski; Bruce E Torbett; Andrew L Routh
Journal:  Nucleic Acids Res       Date:  2022-04-22       Impact factor: 19.160

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