Literature DB >> 30098062

Rhodobacterales use a unique L-threonine kinase for the assembly of the nucleotide loop of coenzyme B12.

Norbert K Tavares1, Chelsey M VanDrisse1, Jorge C Escalante-Semerena1.   

Abstract

Several of the enzymes involved in the conversion of adenosylcobyric acid (AdoCby) to adenosylcobamide (AdoCba) are yet to be identified and characterized in some cobamide (Cba)-producing prokaryotes. Using a bioinformatics approach, we identified the bluE gene (locus tag RSP_0788) of Rhodobacter sphaeroides 2.4.1 as a putative functional homolog of the L-threonine kinase enzyme (PduX, EC 2.7.1.177) of S. enterica. In AdoCba, (R)-1-aminopropan-2-ol O-phosphate (AP-P) links the nucleotide loop to the corrin ring; most known AdoCba producers derive AP-P from L-Thr-O-3-phosphate (L-Thr-P). Here, we show that RsBluE has L-Thr-independent ATPase activity in vivo and in vitro. We used 31 P-NMR spectroscopy to show that RsBluE generates L-Thr-P at the expense of ATP and is unable to use L-Ser as a substrate. BluE from R. sphaeroides or Rhodobacter capsulatus restored AdoCba biosynthesis in S. enterica ΕpduX and R. sphaeroides ΕbluE mutant strains. R. sphaeroides ΕbluE strains exhibited a decreased pigment phenotype that was restored by complementation with BluE. Finally, phylogenetic analyses revealed that bluE was restricted to the genomes of a few Rhodobacterales that appear to have a preference for a specific form of Cba, namely Coᴽ-(ᴽ-5,6-dimethylbenzimidazolyl-Coᵦ-adenosylcobamide (a.k.a. adenosylcobalamin, AdoCbl; coenzyme B12 , CoB12 ).
© 2018 John Wiley & Sons Ltd.

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Year:  2018        PMID: 30098062      PMCID: PMC6195846          DOI: 10.1111/mmi.14100

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  92 in total

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Journal:  J Bacteriol       Date:  1991-10       Impact factor: 3.490

2.  Novel reductive dehalogenases from the marine sponge associated bacterium Desulfoluna spongiiphila.

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Journal:  Environ Microbiol Rep       Date:  2017-07-21       Impact factor: 3.541

3.  CbiX: a novel metal-binding protein involved in sirohaem biosynthesis in Bacillus megaterium.

Authors:  R Beck; E Raux; C Thermes; A Rambach; M Warren
Journal:  Biochem Soc Trans       Date:  1997-02       Impact factor: 5.407

4.  Ethanolamine utilization in Salmonella typhimurium.

Authors:  D M Roof; J R Roth
Journal:  J Bacteriol       Date:  1988-09       Impact factor: 3.490

5.  Anaerobic chlorophyll isocyclic ring formation in Rhodobacter capsulatus requires a cobalamin cofactor.

Authors:  S P Gough; B O Petersen; J O Duus
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-06       Impact factor: 11.205

6.  New approach to the cultivation of methanogenic bacteria: 2-mercaptoethanesulfonic acid (HS-CoM)-dependent growth of Methanobacterium ruminantium in a pressureized atmosphere.

Authors:  W E Balch; R S Wolfe
Journal:  Appl Environ Microbiol       Date:  1976-12       Impact factor: 4.792

7.  Comparative genomics of the vitamin B12 metabolism and regulation in prokaryotes.

Authors:  Dmitry A Rodionov; Alexey G Vitreschak; Andrey A Mironov; Mikhail S Gelfand
Journal:  J Biol Chem       Date:  2003-07-17       Impact factor: 5.157

8.  Elucidation of the anaerobic pathway for the corrin component of cobalamin (vitamin B12).

Authors:  Simon J Moore; Andrew D Lawrence; Rebekka Biedendieck; Evelyne Deery; Stefanie Frank; Mark J Howard; Stephen E J Rigby; Martin J Warren
Journal:  Proc Natl Acad Sci U S A       Date:  2013-08-06       Impact factor: 11.205

9.  Metabolic engineering of cobalamin (vitamin B12) production in Bacillus megaterium.

Authors:  Rebekka Biedendieck; Marco Malten; Heiko Barg; Boyke Bunk; Jan-Henning Martens; Evelyne Deery; Helen Leech; Martin J Warren; Dieter Jahn
Journal:  Microb Biotechnol       Date:  2009-06-10       Impact factor: 5.813

10.  How a protein binds B12: A 3.0 A X-ray structure of B12-binding domains of methionine synthase.

Authors:  C L Drennan; S Huang; J T Drummond; R G Matthews; M L Ludwig
Journal:  Science       Date:  1994-12-09       Impact factor: 47.728

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  3 in total

1.  The l-Thr Kinase/l-Thr-Phosphate Decarboxylase (CobD) Enzyme from Methanosarcina mazei Gö1 Contains Metallocenters Needed for Optimal Activity.

Authors:  Norbert K Tavares; Nuru Stracey; Thomas C Brunold; Jorge C Escalante-Semerena
Journal:  Biochemistry       Date:  2019-07-17       Impact factor: 3.162

Review 2.  Microbial and Genetic Resources for Cobalamin (Vitamin B12) Biosynthesis: From Ecosystems to Industrial Biotechnology.

Authors:  Larissa Balabanova; Liudmila Averianova; Maksim Marchenok; Oksana Son; Liudmila Tekutyeva
Journal:  Int J Mol Sci       Date:  2021-04-26       Impact factor: 5.923

Review 3.  Biosynthesis of the modified tetrapyrroles-the pigments of life.

Authors:  Donald A Bryant; C Neil Hunter; Martin J Warren
Journal:  J Biol Chem       Date:  2020-04-02       Impact factor: 5.157

  3 in total

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