Literature DB >> 30082736

A western Sahara centre of domestication inferred from pearl millet genomes.

Concetta Burgarella1,2, Philippe Cubry3, Ndjido A Kane4,5, Rajeev K Varshney6, Cedric Mariac7, Xin Liu8, Chengcheng Shi8, Mahendar Thudi6, Marie Couderc7, Xun Xu8, Annapurna Chitikineni6, Nora Scarcelli7, Adeline Barnaud7,5, Bénédicte Rhoné7,9, Christian Dupuy10, Olivier François11, Cécile Berthouly-Salazar12,13, Yves Vigouroux14.   

Abstract

There have been intense debates over the geographic origin of African crops and agriculture. Here, we used whole-genome sequencing data to infer the domestication origin of pearl millet (Cenchrus americanus). Our results supported an origin in western Sahara, and we dated the onset of cultivated pearl millet expansion in Africa to 4,900 years ago. We provided evidence that wild-to-crop gene flow increased cultivated genetic diversity leading to diversity hotspots in western and eastern Sahel and adaptive introgression of 15 genomic regions. Our study reconciled genetic and archaeological data for one of the oldest African crops.

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Year:  2018        PMID: 30082736     DOI: 10.1038/s41559-018-0643-y

Source DB:  PubMed          Journal:  Nat Ecol Evol        ISSN: 2397-334X            Impact factor:   15.460


  16 in total

1.  Gene network simulations provide testable predictions for the molecular domestication syndrome.

Authors:  Ewen Burban; Maud I Tenaillon; Arnaud Le Rouzic
Journal:  Genetics       Date:  2022-02-04       Impact factor: 4.402

2.  Individualistic evolutionary responses of Central African rain forest plants to Pleistocene climatic fluctuations.

Authors:  Andrew J Helmstetter; Kevin Béthune; Narcisse G Kamdem; Bonaventure Sonké; Thomas L P Couvreur
Journal:  Proc Natl Acad Sci U S A       Date:  2020-12-04       Impact factor: 12.779

3.  Genomic diversity in pearl millet inbred lines derived from landraces and improved varieties.

Authors:  Ghislain Kanfany; Desalegn D Serba; Davina Rhodes; Paul St Amand; Amy Bernardo; Prakash I Gangashetty; Ndjido Ardo Kane; Guihua Bai
Journal:  BMC Genomics       Date:  2020-07-08       Impact factor: 3.969

4.  Transcriptome analysis of heat stress and drought stress in pearl millet based on Pacbio full-length transcriptome sequencing.

Authors:  Min Sun; Dejun Huang; Ailing Zhang; Imran Khan; Haidong Yan; Xiaoshan Wang; Xinquan Zhang; Jian Zhang; Linkai Huang
Journal:  BMC Plant Biol       Date:  2020-07-08       Impact factor: 4.215

5.  Yam genomics supports West Africa as a major cradle of crop domestication.

Authors:  Nora Scarcelli; Philippe Cubry; Roland Akakpo; Anne-Céline Thuillet; Jude Obidiegwu; Mohamed N Baco; Emmanuel Otoo; Bonaventure Sonké; Alexandre Dansi; Gustave Djedatin; Cédric Mariac; Marie Couderc; Sandrine Causse; Karine Alix; Hâna Chaïr; Olivier François; Yves Vigouroux
Journal:  Sci Adv       Date:  2019-05-01       Impact factor: 14.136

6.  GWAS unveils features between early- and late-flowering pearl millets.

Authors:  Oumar Diack; Ghislain Kanfany; Mame Codou Gueye; Ousmane Sy; Amadou Fofana; Hamidou Tall; Desalegn D Serba; Leila Zekraoui; Cécile Berthouly-Salazar; Yves Vigouroux; Diaga Diouf; Ndjido Ardo Kane
Journal:  BMC Genomics       Date:  2020-11-10       Impact factor: 3.969

7.  Genome-wide genotyping elucidates the geographical diversification and dispersal of the polyploid and clonally propagated yam (Dioscorea alata).

Authors:  Bilal Muhammad Sharif; Concetta Burgarella; Fabien Cormier; Pierre Mournet; Sandrine Causse; Kien Nguyen Van; Juliane Kaoh; Mamy Tiana Rajaonah; Senanayake Ravinda Lakshan; Jeffrey Waki; Ranjana Bhattacharjee; Gueye Badara; Babil Pachakkil; Gemma Arnau; Hana Chaïr
Journal:  Ann Bot       Date:  2020-10-30       Impact factor: 4.357

8.  Cultivated and wild pearl millet display contrasting patterns of abundance and co-occurrence in their root mycobiome.

Authors:  Marie-Thérèse Mofini; Abdala G Diedhiou; Marie Simonin; Donald Tchouomo Dondjou; Sarah Pignoly; Cheikh Ndiaye; Doohong Min; Yves Vigouroux; Laurent Laplaze; Aboubacry Kane
Journal:  Sci Rep       Date:  2022-01-07       Impact factor: 4.996

9.  Genomic Analyses of Unveil Helmeted Guinea Fowl (Numida meleagris) Domestication in West Africa.

Authors:  Quan-Kuan Shen; Min-Sheng Peng; Adeniyi C Adeola; Ling Kui; Shengchang Duan; Yong-Wang Miao; Nada M Eltayeb; Jacqueline K Lichoti; Newton O Otecko; Maria Giuseppina Strillacci; Erica Gorla; Alessandro Bagnato; Olaogun S Charles; Oscar J Sanke; Philip M Dawuda; Agboola O Okeyoyin; John Musina; Peter Njoroge; Bernard Agwanda; Szilvia Kusza; Hojjat Asadollahpour Nanaei; Rana Pedar; Ming-Min Xu; Yuan Du; Lotanna M Nneji; Robert W Murphy; Ming-Shan Wang; Ali Esmailizadeh; Yang Dong; Sheila C Ommeh; Ya-Ping Zhang
Journal:  Genome Biol Evol       Date:  2021-06-08       Impact factor: 3.416

10.  Abandonment of pearl millet cropping and homogenization of its diversity over a 40 year period in Senegal.

Authors:  Katina F Olodo; Adeline Barnaud; Ndjido A Kane; Cédric Mariac; Adama Faye; Marie Couderc; Leïla Zekraouï; Anaïs Dequincey; Diégane Diouf; Yves Vigouroux; Cécile Berthouly-Salazar
Journal:  PLoS One       Date:  2020-09-14       Impact factor: 3.240

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