Literature DB >> 30078641

Influence of Lipid Mimetics on Gating of Ryanodine Receptor.

Katrien Willegems1, Rouslan G Efremov2.   

Abstract

Understanding gating principles of ion channels at high resolution is of great importance. Here we investigate the conformational transition from closed to open state in ryanodine receptor 1 (RyR1) reconstituted into lipid nanodiscs. RyR1 is a homotetrameric giant ion channel that couples excitation of muscle cells to fast calcium release from the sarcoplasmic reticulum. Using single-particle cryo-EM we show that RyR1 reconstituted into lipid nanodiscs is stabilized in the open conformation when bound to the plant toxin ryanodine, but not in the presence of its physiological activators, calcium and ATP. Further, using ryanodine binding assays we show that membrane mimetics influence RyR1 transition between closed and open-channel conformations. We find that all detergents, including fluorinated detergents added to nanodiscs, stabilize closed state of RyR1. Our biochemical results correlate with available structural data and suggest optimal conditions for structural studies of RyR1 gating.
Copyright © 2018 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  calcium signaling; cryo-EM; ion channel gating; lipid mimetic; lipid nanodiscs; ryanodine receptor

Mesh:

Substances:

Year:  2018        PMID: 30078641     DOI: 10.1016/j.str.2018.06.010

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  11 in total

1.  The FKBP12 subunit modifies the long-range allosterism of the ryanodine receptor.

Authors:  Tyler W E Steele; Montserrat Samsó
Journal:  J Struct Biol       Date:  2019-01-11       Impact factor: 2.867

Review 2.  The role of π-helices in TRP channel gating.

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Journal:  Curr Opin Struct Biol       Date:  2019-08-02       Impact factor: 6.809

3.  Megabodies expand the nanobody toolkit for protein structure determination by single-particle cryo-EM.

Authors:  Tomasz Uchański; Simonas Masiulis; Baptiste Fischer; Valentina Kalichuk; Uriel López-Sánchez; Eleftherios Zarkadas; Miriam Weckener; Andrija Sente; Philip Ward; Alexandre Wohlkönig; Thomas Zögg; Han Remaut; James H Naismith; Hugues Nury; Wim Vranken; A Radu Aricescu; Els Pardon; Jan Steyaert
Journal:  Nat Methods       Date:  2021-01-06       Impact factor: 47.990

4.  Cryo-EM reveals ligand induced allostery underlying InsP3R channel gating.

Authors:  Guizhen Fan; Mariah R Baker; Zhao Wang; Alexander B Seryshev; Steven J Ludtke; Matthew L Baker; Irina I Serysheva
Journal:  Cell Res       Date:  2018-11-23       Impact factor: 25.617

Review 5.  Recent advances in understanding the ryanodine receptor calcium release channels and their role in calcium signalling.

Authors:  Angela F Dulhunty; Nicole A Beard; Marco G Casarotto
Journal:  F1000Res       Date:  2018-11-27

6.  Insights into channel modulation mechanism of RYR1 mutants using Ca2+ imaging and molecular dynamics.

Authors:  Toshiko Yamazawa; Haruo Ogawa; Takashi Murayama; Maki Yamaguchi; Hideto Oyamada; Junji Suzuki; Nagomi Kurebayashi; Kazunori Kanemaru; Katsuji Oguchi; Takashi Sakurai; Masamitsu Iino
Journal:  J Gen Physiol       Date:  2020-01-06       Impact factor: 4.000

7.  Pathological conformations of disease mutant Ryanodine Receptors revealed by cryo-EM.

Authors:  Kellie A Woll; Omid Haji-Ghassemi; Filip Van Petegem
Journal:  Nat Commun       Date:  2021-02-05       Impact factor: 14.919

8.  Structure of RyR1 in native membranes.

Authors:  Wenbo Chen; Mikhail Kudryashev
Journal:  EMBO Rep       Date:  2020-03-09       Impact factor: 8.807

9.  Molecular basis for allosteric regulation of the type 2 ryanodine receptor channel gating by key modulators.

Authors:  Ximin Chi; Deshun Gong; Kang Ren; Gewei Zhou; Gaoxingyu Huang; Jianlin Lei; Qiang Zhou; Nieng Yan
Journal:  Proc Natl Acad Sci U S A       Date:  2019-12-02       Impact factor: 11.205

Review 10.  Structure and Function of the Human Ryanodine Receptors and Their Association with Myopathies-Present State, Challenges, and Perspectives.

Authors:  Vladena Bauerová-Hlinková; Dominika Hajdúchová; Jacob A Bauer
Journal:  Molecules       Date:  2020-09-04       Impact factor: 4.411

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