Literature DB >> 31378426

The role of π-helices in TRP channel gating.

Lejla Zubcevic1, Seok-Yong Lee2.   

Abstract

Transient Receptor Potential (TRP) channels are a large superfamily of polymodal ion channels, which perform important roles in numerous physiological processes. The architecture of their transmembrane (TM) domains closely resembles that of voltage-gated potassium channels (KV). However, recent cryoEM and crystallographic studies of TRP channels have identified π-helices in functionally important regions, and it is increasingly recognized that they utilize a distinct mechanism of gating that relies on α-to-π secondary structure transitions. Here we review our current understanding of the role of π-helices in TRP channel function and their broader impact on different classes of ion channels.
Copyright © 2019 Elsevier Ltd. All rights reserved.

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Year:  2019        PMID: 31378426      PMCID: PMC6778516          DOI: 10.1016/j.sbi.2019.06.011

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  62 in total

1.  The structure of proteins; two hydrogen-bonded helical configurations of the polypeptide chain.

Authors:  L PAULING; R B COREY; H R BRANSON
Journal:  Proc Natl Acad Sci U S A       Date:  1951-04       Impact factor: 11.205

2.  Structural basis of cooling agent and lipid sensing by the cold-activated TRPM8 channel.

Authors:  Ying Yin; Son C Le; Allen L Hsu; Mario J Borgnia; Huanghe Yang; Seok-Yong Lee
Journal:  Science       Date:  2019-02-07       Impact factor: 47.728

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Authors:  D E Clapham; L W Runnels; C Strübing
Journal:  Nat Rev Neurosci       Date:  2001-06       Impact factor: 34.870

4.  Hysteresis of gating underlines sensitization of TRPV3 channels.

Authors:  Beiying Liu; Jing Yao; Michael X Zhu; Feng Qin
Journal:  J Gen Physiol       Date:  2011-10-17       Impact factor: 4.086

5.  Structure of the rabbit ryanodine receptor RyR1 at near-atomic resolution.

Authors:  Zhen Yan; Xiaochen Bai; Chuangye Yan; Jianping Wu; Zhangqiang Li; Tian Xie; Wei Peng; Changcheng Yin; Xueming Li; Sjors H W Scheres; Yigong Shi; Nieng Yan
Journal:  Nature       Date:  2014-12-15       Impact factor: 49.962

6.  Structure and gating mechanism of the transient receptor potential channel TRPV3.

Authors:  Appu K Singh; Luke L McGoldrick; Alexander I Sobolevsky
Journal:  Nat Struct Mol Biol       Date:  2018-08-20       Impact factor: 15.369

7.  Conformational ensemble of the human TRPV3 ion channel.

Authors:  Lejla Zubcevic; Mark A Herzik; Mengyu Wu; William F Borschel; Marscha Hirschi; Albert S Song; Gabriel C Lander; Seok-Yong Lee
Journal:  Nat Commun       Date:  2018-11-14       Impact factor: 14.919

8.  TRPV1 structures in nanodiscs reveal mechanisms of ligand and lipid action.

Authors:  Yuan Gao; Erhu Cao; David Julius; Yifan Cheng
Journal:  Nature       Date:  2016-05-18       Impact factor: 49.962

9.  Electron cryo-microscopy structure of the canonical TRPC4 ion channel.

Authors:  Deivanayagabarathy Vinayagam; Thomas Mager; Amir Apelbaum; Arne Bothe; Felipe Merino; Oliver Hofnagel; Christos Gatsogiannis; Stefan Raunser
Journal:  Elife       Date:  2018-05-02       Impact factor: 8.140

10.  Structural basis for the regulation of inositol trisphosphate receptors by Ca2+ and IP3.

Authors:  Navid Paknejad; Richard K Hite
Journal:  Nat Struct Mol Biol       Date:  2018-07-16       Impact factor: 15.369

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  17 in total

Review 1.  Structural insights into the gating mechanisms of TRPV channels.

Authors:  Ruth A Pumroy; Edwin C Fluck; Tofayel Ahmed; Vera Y Moiseenkova-Bell
Journal:  Cell Calcium       Date:  2020-01-24       Impact factor: 6.817

2.  An open state of a voltage-gated sodium channel involving a π-helix and conserved pore-facing asparagine.

Authors:  Koushik Choudhury; Marina A Kasimova; Sarah McComas; Rebecca J Howard; Lucie Delemotte
Journal:  Biophys J       Date:  2021-12-08       Impact factor: 4.033

3.  Structure of the ancient TRPY1 channel from Saccharomyces cerevisiae reveals mechanisms of modulation by lipids and calcium.

Authors:  Tofayel Ahmed; Collin R Nisler; Edwin C Fluck; Sanket Walujkar; Marcos Sotomayor; Vera Y Moiseenkova-Bell
Journal:  Structure       Date:  2021-08-27       Impact factor: 5.006

Review 4.  TRP channels: a journey towards a molecular understanding of pain.

Authors:  Tamara Rosenbaum; Sara L Morales-Lázaro; León D Islas
Journal:  Nat Rev Neurosci       Date:  2022-07-13       Impact factor: 38.755

Review 5.  Sensory TRP Channels in Three Dimensions.

Authors:  Melinda M Diver; John V Lin King; David Julius; Yifan Cheng
Journal:  Annu Rev Biochem       Date:  2022-03-14       Impact factor: 27.258

6.  Heat-dependent opening of TRPV1 in the presence of capsaicin.

Authors:  Do Hoon Kwon; Feng Zhang; Yang Suo; Jonathan Bouvette; Mario J Borgnia; Seok-Yong Lee
Journal:  Nat Struct Mol Biol       Date:  2021-07-08       Impact factor: 15.369

7.  Structural Insights into Electrophile Irritant Sensing by the Human TRPA1 Channel.

Authors:  Yang Suo; Zilong Wang; Lejla Zubcevic; Allen L Hsu; Qianru He; Mario J Borgnia; Ru-Rong Ji; Seok-Yong Lee
Journal:  Neuron       Date:  2019-12-19       Impact factor: 17.173

8.  Voltage vs. Ligand I: Structural basis of the intrinsic flexibility of S3 segment and its significance in ion channel activation.

Authors:  Daniel Balleza; Mario E Rosas; Sergio Romero-Romero
Journal:  Channels (Austin)       Date:  2019-12       Impact factor: 2.581

Review 9.  Current View of Ligand and Lipid Recognition by the Menthol Receptor TRPM8.

Authors:  Ying Yin; Seok-Yong Lee
Journal:  Trends Biochem Sci       Date:  2020-06-09       Impact factor: 14.264

Review 10.  High-resolution structures of transient receptor potential vanilloid channels: Unveiling a functionally diverse group of ion channels.

Authors:  Mark K van Goor; Leanne de Jager; Yifan Cheng; Jenny van der Wijst
Journal:  Protein Sci       Date:  2020-04-11       Impact factor: 6.725

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