Literature DB >> 30077972

Aggregation-phase diagrams of β2-microglobulin reveal temperature and salt effects on competitive formation of amyloids versus amorphous aggregates.

Masayuki Adachi1, Masahiro Noji1, Masatomo So1, Kenji Sasahara1, József Kardos2, Hironobu Naiki3, Yuji Goto4.   

Abstract

Several serious diseases are associated with crystal-like amyloid fibrils or glass-like amorphous aggregates of denatured proteins. However, protein aggregation involving both types of aggregates has not yet been elucidated in much detail. Using a protein associated with dialysis-related amyloidosis, β2-microglobulin (β2m), we previously demonstrated that amyloid fibrils and amorphous aggregates form competitively depending on salt (NaCl) concentration. To examine the generality of the underlying competitive mechanisms, we herein investigated the effects of heat on acid-denatured β2m at pH 2. Using thioflavin fluorescence, CD, and light scattering analysis along with atomic force microscopy imaging, we found that the temperature-dependent aggregation of β2m markedly depends on NaCl concentration. Stepwise transitions from monomers to amyloids and then back to monomers were observed at low NaCl concentrations. Amorphous aggregates formed rapidly at ambient temperatures at high NaCl concentrations, but the transition from amorphous aggregates to amyloids occurred only as the temperature increased. Combining the data from the temperature- and NaCl-dependent transitions, we constructed a unified phase diagram of conformational states, indicating a parabolic solubility curve with a minimum NaCl concentration at ambient temperatures. Although amyloid fibrils formed above this solubility boundary, amorphous aggregates dominated in regions distant from this boundary. Kinetic competition between supersaturation-limited slow amyloid fibrillation and supersaturation-unlimited fast amorphous aggregation deformed the phase diagram, with amyloid regions disappearing with fast titration rates. We conclude that phase diagrams combining thermodynamics and kinetics data provide a comprehensive view of β2m aggregation exhibiting severe hysteresis depending on the heat- or salt-titration rates.
© 2018 Adachi et al.

Entities:  

Keywords:  amyloid; beta2-microglobulin; calorimetry; fluorescence; phase transition; protein aggregation; protein folding; solubility; structural dynamics; supersaturation

Mesh:

Substances:

Year:  2018        PMID: 30077972      PMCID: PMC6153281          DOI: 10.1074/jbc.RA118.004683

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  42 in total

1.  A thermodynamic analysis of fibrillar polymorphism.

Authors:  Martin D Jeppesen; Kim Hein; Poul Nissen; Peter Westh; Daniel E Otzen
Journal:  Biophys Chem       Date:  2010-04-09       Impact factor: 2.352

2.  Direct measurement of the thermodynamic parameters of amyloid formation by isothermal titration calorimetry.

Authors:  József Kardos; Kaori Yamamoto; Kazuhiro Hasegawa; Hironobu Naiki; Yuji Goto
Journal:  J Biol Chem       Date:  2004-10-19       Impact factor: 5.157

3.  Heat-triggered conversion of protofibrils into mature amyloid fibrils of beta2-microglobulin.

Authors:  Kenji Sasahara; Hisashi Yagi; Hironobu Naiki; Yuji Goto
Journal:  Biochemistry       Date:  2007-02-23       Impact factor: 3.162

4.  Amyloid nucleation triggered by agitation of beta2-microglobulin under acidic and neutral pH conditions.

Authors:  Kenji Sasahara; Hisashi Yagi; Miyo Sakai; Hironobu Naiki; Yuji Goto
Journal:  Biochemistry       Date:  2008-01-23       Impact factor: 3.162

Review 5.  Crystallin proteins and amyloid fibrils.

Authors:  H Ecroyd; John A Carver
Journal:  Cell Mol Life Sci       Date:  2009-01       Impact factor: 9.261

6.  Heat of supersaturation-limited amyloid burst directly monitored by isothermal titration calorimetry.

Authors:  Tatsuya Ikenoue; Young-Ho Lee; József Kardos; Hisashi Yagi; Takahisa Ikegami; Hironobu Naiki; Yuji Goto
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-21       Impact factor: 11.205

Review 7.  The activities of amyloids from a structural perspective.

Authors:  Roland Riek; David S Eisenberg
Journal:  Nature       Date:  2016-11-10       Impact factor: 49.962

8.  Cold denaturation of myoglobin.

Authors:  P L Privalov; V P Kutyshenko
Journal:  J Mol Biol       Date:  1986-08-05       Impact factor: 5.469

9.  Heparin-dependent aggregation of hen egg white lysozyme reveals two distinct mechanisms of amyloid fibrillation.

Authors:  Ayame Nitani; Hiroya Muta; Masayuki Adachi; Masatomo So; Kenji Sasahara; Kazumasa Sakurai; Eri Chatani; Kazumitsu Naoe; Hirotsugu Ogi; Damien Hall; Yuji Goto
Journal:  J Biol Chem       Date:  2017-11-03       Impact factor: 5.157

10.  Stable, metastable, and kinetically trapped amyloid aggregate phases.

Authors:  Tatiana Miti; Mentor Mulaj; Jeremy D Schmit; Martin Muschol
Journal:  Biomacromolecules       Date:  2014-12-18       Impact factor: 6.988

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  9 in total

1.  Possible mechanisms of polyphosphate-induced amyloid fibril formation of β2-microglobulin.

Authors:  Chun-Ming Zhang; Keiichi Yamaguchi; Masatomo So; Kenji Sasahara; Toru Ito; Suguru Yamamoto; Ichiei Narita; József Kardos; Hironobu Naiki; Yuji Goto
Journal:  Proc Natl Acad Sci U S A       Date:  2019-06-10       Impact factor: 11.205

2.  Polyphosphates diminish solubility of a globular protein and thereby promote amyloid aggregation.

Authors:  Kenji Sasahara; Keiichi Yamaguchi; Masatomo So; Yuji Goto
Journal:  J Biol Chem       Date:  2019-08-22       Impact factor: 5.157

3.  Heating during agitation of β2-microglobulin reveals that supersaturation breakdown is required for amyloid fibril formation at neutral pH.

Authors:  Masahiro Noji; Kenji Sasahara; Keiichi Yamaguchi; Masatomo So; Kazumasa Sakurai; József Kardos; Hironobu Naiki; Yuji Goto
Journal:  J Biol Chem       Date:  2019-09-08       Impact factor: 5.157

Review 4.  Amyloid Oligomers: A Joint Experimental/Computational Perspective on Alzheimer's Disease, Parkinson's Disease, Type II Diabetes, and Amyotrophic Lateral Sclerosis.

Authors:  Phuong H Nguyen; Ayyalusamy Ramamoorthy; Bikash R Sahoo; Jie Zheng; Peter Faller; John E Straub; Laura Dominguez; Joan-Emma Shea; Nikolay V Dokholyan; Alfonso De Simone; Buyong Ma; Ruth Nussinov; Saeed Najafi; Son Tung Ngo; Antoine Loquet; Mara Chiricotto; Pritam Ganguly; James McCarty; Mai Suan Li; Carol Hall; Yiming Wang; Yifat Miller; Simone Melchionna; Birgit Habenstein; Stepan Timr; Jiaxing Chen; Brianna Hnath; Birgit Strodel; Rakez Kayed; Sylvain Lesné; Guanghong Wei; Fabio Sterpone; Andrew J Doig; Philippe Derreumaux
Journal:  Chem Rev       Date:  2021-02-05       Impact factor: 60.622

5.  Breakdown of supersaturation barrier links protein folding to amyloid formation.

Authors:  Masahiro Noji; Tatsushi Samejima; Keiichi Yamaguchi; Masatomo So; Keisuke Yuzu; Eri Chatani; Yoko Akazawa-Ogawa; Yoshihisa Hagihara; Yasushi Kawata; Kensuke Ikenaka; Hideki Mochizuki; József Kardos; Daniel E Otzen; Vittorio Bellotti; Johannes Buchner; Yuji Goto
Journal:  Commun Biol       Date:  2021-01-26

6.  Polyphosphates induce amyloid fibril formation of α-synuclein in concentration-dependent distinct manners.

Authors:  Keiichi Yamaguchi; Masatomo So; César Aguirre; Kensuke Ikenaka; Hideki Mochizuki; Yasushi Kawata; Yuji Goto
Journal:  J Biol Chem       Date:  2021-03-04       Impact factor: 5.157

Review 7.  Supersaturation-Dependent Formation of Amyloid Fibrils.

Authors:  Yuji Goto; Masahiro Noji; Kichitaro Nakajima; Keiichi Yamaguchi
Journal:  Molecules       Date:  2022-07-19       Impact factor: 4.927

8.  The influence of cations on α-lactalbumin amyloid aggregation.

Authors:  Andrea Antosova; Miroslav Gancar; Zuzana Bednarikova; Jozef Marek; Eva Bystrenova; Zuzana Gazova
Journal:  J Biol Inorg Chem       Date:  2022-09-23       Impact factor: 3.862

9.  Polyphenol-solubility alters amyloid fibril formation of α-synuclein.

Authors:  Masatomo So; Yuto Kimura; Keiichi Yamaguchi; Toshihiko Sugiki; Toshimichi Fujiwara; Cesar Aguirre; Kensuke Ikenaka; Hideki Mochizuki; Yasushi Kawata; Yuji Goto
Journal:  Protein Sci       Date:  2021-06-02       Impact factor: 6.993

  9 in total

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