Literature DB >> 30069723

Draft genome sequence of the symbiotic Frankia sp. strain BMG5.30 isolated from root nodules of Coriaria myrtifolia in Tunisia.

Abdellatif Gueddou1,2, Erik Swanson3, Karima Hezbri1,2, Imen Nouioui1,2, Amir Ktari1,2, Stephen Simpson3, Krystalynne Morris3, W Kelley Thomas3, Faten Ghodhbane-Gtari1,2, Maher Gtari4, Louis S Tisa5.   

Abstract

Frankia sp. strain BMG5.30 was isolated from root nodules of a Coriaria myrtifolia seedling on soil collected in Tunisia and represents the second cluster 2 isolate. Frankia sp. strain BMG5.30 was able to re-infect C. myrtifolia generating root nodules. Here, we report its 5.8-Mbp draft genome sequence with a G + C content of 70.03% and 4509 candidate protein-encoding genes.

Entities:  

Keywords:  Actinobacteria; Actinorhizal symbiosis; Genomes; Host microbe interactions; Hydrogenase; Natural products; Nitrogen fixation

Mesh:

Year:  2018        PMID: 30069723     DOI: 10.1007/s10482-018-1138-1

Source DB:  PubMed          Journal:  Antonie Van Leeuwenhoek        ISSN: 0003-6072            Impact factor:   2.271


  3 in total

1.  The Peptidoglycan Biosynthesis Gene murC in Frankia: Actinorhizal vs. Plant Type.

Authors:  Fede Berckx; Daniel Wibberg; Jörn Kalinowski; Katharina Pawlowski
Journal:  Genes (Basel)       Date:  2020-04-16       Impact factor: 4.096

2.  A tale of two lineages: how the strains of the earliest divergent symbiotic Frankia clade spread over the world.

Authors:  Fede Berckx; Thanh Van Nguyen; Cyndi Mae Bandong; Hsiao-Han Lin; Takashi Yamanaka; Sae Katayama; Daniel Wibberg; Jochen Blom; Jörn Kalinowski; Masaki Tateno; Jessica Simbahan; Chi-Te Liu; Andreas Brachmann; Katharina Pawlowski
Journal:  BMC Genomics       Date:  2022-08-19       Impact factor: 4.547

3.  Comparative Analysis of the Nodule Transcriptomes of Ceanothus thyrsiflorus (Rhamnaceae, Rosales) and Datisca glomerata (Datiscaceae, Cucurbitales).

Authors:  Marco G Salgado; Robin van Velzen; Thanh Van Nguyen; Kai Battenberg; Alison M Berry; Daniel Lundin; Katharina Pawlowski
Journal:  Front Plant Sci       Date:  2018-11-14       Impact factor: 5.753

  3 in total

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