Literature DB >> 30069573

Structural, functional and evolutionary perspectives on effective re-engineering of non-ribosomal peptide synthetase assembly lines.

Alistair S Brown1, Mark J Calcott, Jeremy G Owen, David F Ackerley.   

Abstract

Covering: up to May 2018 Non-ribosomal peptide synthetases (NRPSs) are mega-enzymes that form modular templates to assemble specific peptide products, independent of the ribosome. The autonomous nature of the modules in the template offers prospects for re-engineering NRPS enzymes to generate modified peptide products. Although this has clearly been a primary mechanism of natural product diversification throughout evolution, equivalent strategies have proven challenging to implement in the laboratory. In this review we examine key examples of successful and less-successful re-engineering of NRPS templates to generate novel peptides, with the aim of extracting practical guidelines to inform future efforts. We emphasise the importance of maintaining effective protein-protein interactions in recombinant NRPS templates, and identify strengths and limitations of diverse strategies for achieving different engineering outcomes.

Mesh:

Substances:

Year:  2018        PMID: 30069573     DOI: 10.1039/c8np00036k

Source DB:  PubMed          Journal:  Nat Prod Rep        ISSN: 0265-0568            Impact factor:   13.423


  17 in total

Review 1.  Type II non-ribosomal peptide synthetase proteins: structure, mechanism, and protein-protein interactions.

Authors:  Matt J Jaremko; Tony D Davis; Joshua C Corpuz; Michael D Burkart
Journal:  Nat Prod Rep       Date:  2020-03-25       Impact factor: 13.423

2.  Aminoacyl chain translocation catalysed by a type II thioesterase domain in an unusual non-ribosomal peptide synthetase.

Authors:  Shan Wang; William D G Brittain; Qian Zhang; Zhou Lu; Ming Him Tong; Kewen Wu; Kwaku Kyeremeh; Matthew Jenner; Yi Yu; Steven L Cobb; Hai Deng
Journal:  Nat Commun       Date:  2022-01-10       Impact factor: 17.694

3.  Efficient rational modification of non-ribosomal peptides by adenylation domain substitution.

Authors:  Mark J Calcott; Jeremy G Owen; David F Ackerley
Journal:  Nat Commun       Date:  2020-09-11       Impact factor: 14.919

Review 4.  The inherent flexibility of type I non-ribosomal peptide synthetase multienzymes drives their catalytic activities.

Authors:  Sarah Bonhomme; Andréa Dessen; Pauline Macheboeuf
Journal:  Open Biol       Date:  2021-05-26       Impact factor: 6.411

5.  Caerulomycin and collismycin antibiotics share a trans-acting flavoprotein-dependent assembly line for 2,2'-bipyridine formation.

Authors:  Bo Pang; Rijing Liao; Zhijun Tang; Shengjie Guo; Zhuhua Wu; Wen Liu
Journal:  Nat Commun       Date:  2021-05-25       Impact factor: 14.919

Review 6.  Engineering enzymatic assembly lines to produce new antibiotics.

Authors:  Kenan Aj Bozhüyük; Jason Micklefield; Barrie Wilkinson
Journal:  Curr Opin Microbiol       Date:  2019-11-16       Impact factor: 7.934

7.  GNPS-guided discovery of xylacremolide C and D, evaluation of their putative biosynthetic origin and bioactivity studies of xylacremolide A and B.

Authors:  Felix Schalk; Janis Fricke; Soohyun Um; Benjamin H Conlon; Hannah Maus; Nils Jäger; Thorsten Heinzel; Tanja Schirmeister; Michael Poulsen; Christine Beemelmanns
Journal:  RSC Adv       Date:  2021-05-24       Impact factor: 4.036

8.  HAMA: a multiplexed LC-MS/MS assay for specificity profiling of adenylate-forming enzymes.

Authors:  Aleksa Stanišić; Annika Hüsken; Hajo Kries
Journal:  Chem Sci       Date:  2019-10-03       Impact factor: 9.825

9.  Structure elucidation of the syringafactin lipopeptides provides insight in the evolution of nonribosomal peptide synthetases.

Authors:  Sebastian Götze; Johannes Arp; Gerald Lackner; Shuaibing Zhang; Hajo Kries; Martin Klapper; María García-Altares; Karsten Willing; Markus Günther; Pierre Stallforth
Journal:  Chem Sci       Date:  2019-12-04       Impact factor: 9.825

10.  Nonribosomal Peptides Produced by Minimal and Engineered Synthetases with Terminal Reductase Domains.

Authors:  Andreas Tietze; Yan-Ni Shi; Max Kronenwerth; Helge B Bode
Journal:  Chembiochem       Date:  2020-06-25       Impact factor: 3.164

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