| Literature DB >> 30067760 |
Micaela Gal1, Nicholas A Francis1, Kerenza Hood2, Jorge Villacian3, Herman Goossens4, Angela Watkins1, Christopher C Butler5.
Abstract
BACKGROUND: Point of care tests (POCTs) are increasingly being promoted for guiding the primary medical care of community acquired lower respiratory tract infections (CA-LRTI). POCT development has seldom been guided by explicitly identified clinical need and requirements of the intended users. Approaches for identifying POCT priorities and developing target product profiles (TPPs) for POCTs in primary medical care are not well developed, and there is no published TPP for a CA-LRTI POCT aimed at developed countries.Entities:
Mesh:
Year: 2018 PMID: 30067760 PMCID: PMC6070214 DOI: 10.1371/journal.pone.0200531
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Objectives of the stakeholder planning meetings.
| No | Objective |
|---|---|
| Familiarise all stakeholders with the expertise and technologies available within the consortium | |
| Discuss potential benefits of optimised disease diagnosis | |
| Reach agreement on target conditions that would most benefit from improved diagnosis for adequate antimicrobial treatment | |
| Consider the clinical complexity of antibiotic treatment decisions | |
| Clarify the current state of the art in diagnostic tools for each disease condition | |
| Reach agreement on micro-organisms, biomarkers and thresholds (e.g. limit of detection, colonisation vs. infection) | |
| Discuss the availability and challenges of clinical sample availability, collection and processing | |
| Develop models of therapeutic algorithms and patient stratification including POCT integration | |
| Discuss potential scenarios from sample collection to read-out | |
| Develop the user survey and discussing the technical feasibility of including the identified ideal user requirements |
Fig 1Survey to identify clinical need, minimum and ideal user requirements and perceived barriers for a new CA-LRTI POCT.
Structure of the target product profile (TPP) document.
| SECTIONS | CONTENTS |
|---|---|
| Authorizations, appendix, glossary, definitions | |
| Reference document for researchers, developers and manufacturers | |
| Workshops, surveys, literature reviews | |
| Include clinical setting, fit into clinical pathway, POCT concept diagram, overview of current tests used in clinical practice | |
| Sample type, nature of samples and target molecules (e.g. biomarkers, pathogens), sampling equipment, acceptability of samples | |
| Intended use statement, descriptions of test concept (description of the desired test) and proof of concept (test and methods that will demonstrate in principle the feasibility of developing a test with the desired TPP) | |
| Intended use, clinical decision to be influenced, place of use, patient criteria, target molecule, performance against reference, type of analysis, readout system, sample type, reproducibility, compliance with regulators, reproducibility near clinical thresholds. | |
| Sample requirements (e.g. volume of sample, sample preparation, quality, requirement for precise volumes), controls, waste disposal, batching, end-user profile, training, biosafety, test speed, test stability, storage requirements, shelf life, lifetime of machine, need for additional equipment, cost. | |
| Cost of manufacturing single device, competitive landscape, regulatory pathway, competitive landscape, region of commercialization, market segmentation | |
| Available and those coming to market. Details on test performance, characteristics, market uptake etc. | |
The gaps and needs for a priority CA-LRTI POCT as defined by an expert consensus process with primary care clinicians.
| Question (number of respondents completing question on ideal and minimum specification) | Answer Options | Ideal specification (number (%) selecting as top priority) | Minimum specification (number (%) selecting as top priority) |
|---|---|---|---|
Treatment monitoring; Initial treatment targeting (prescribing optimal and appropriate antibiotic) De-escalation of treatment from earlier more powerful (broad-spectrum) to less powerful appropriate antibiotic | Initial treatment targeting (40, (97.6)) | Initial treatment targeting (34 (82.9)) | |
Neonates; Children; Adults <65 years; Adults 65–80 years; Adults >80 years | Adults aged 65–80 years (25 (65.8)) | Adults aged 65–80 years (19 (48.7)) | |
Antibiotic pre-treated; Antibiotic naïve (no previous antibiotic treatment for that episode) All patients | All patients including antibiotic pre-treated and antibiotic naïve patients (17 (41.5)) | Antibiotic naïve (25 (65.8)) | |
Doctors Nurses Practice nurse Nurse practitioner | Doctors (33 (82.5)) | Doctors (29 (70.7)) | |
Bacteria Viruses | Bacteria (36 (85.7)) | Not Available (NA) | |
List of common respiratory pathogens Other Unsure | NA | ||
Gram-positive / Gram-negative Genus level (e.g. Species level (e.g. Genus level and quantification Species level and quantification Unsure 4&5) and e.g. for de-escalation of treatment or colonisation vs. infection | Gram-positive / Gram-negative (9 (26.5)); Species level (8 (23.5)); Unsure (13 (38)). | Gram-positive / Gram-negative (8(50)) | |
Yes No | Yes (39 (97.5)) | NA | |
List of antibiotics (including generic names and groups); Other | Penicillin’s (25 (69.4)); Macrolides (17 (47.2)); Amoxicillin-Clavulanate (16 (44.4)); Beta-lactamases (14 (38.9)); Fluoroquinolones (14 (38.9)); Cephalosporins (13 (36.1)) | NA | |
Resistance gene absent; Resistance gene present; Sensitive/resistant corresponding to antibiotic breakpoint; Unsure | Sensitive/resistant corresponding to antibiotic breakpoints (24 (63.2)); Unsure (13 (34)) | Sensitive/resistant corresponding to antibiotic breakpoints (17 (81)) | |
List of common respiratory viruses; Other; Unsure | Influenza (10 (90.9)); Respiratory syncytial virus (6 (54.5)); Para-influenza and adenoviruses (4 (36.4)) | NA | |
Species identification; Species and strain identification; Species and viral load; Flu A/B discrimination; Unsure | Species level identification (6 (50)); Unsure (4 (33.3)) | Species level identification (5 (55.6)) | |
Yes; No | Yes 25 (64.1)) | NA | |
List of antivirals; Other; Unsure | Oseltamivir (Tamiflu) (8 (57.1)); Unsure (4(28.6)) | Oseltamivir (7 987.5)) | |
Rate of true positives Rate of true negatives Rate of false positives Rate of false negatives Unsure | Rate of true positives (20 (55.6)); Rate of true negatives (16 (44.4)); Unsure (5 (13.9)) | Rate of true negatives (18 (62.1)) | |
<30 minutes <1 hour 1–2 hours 2–4 hors >6 hours Other | <30 minutes (30 (85.7)) | <30 minutes (22 (81.5)) |
Clinicians’ technical and operational requirements, and specifications preventing test use.
| TECNHICAL/OPERATIONAL FEATURE | CLINICIANS IDEAL REQUIREMENTS | SPECIFICATION THAT WOULD PREVENT CONSIDERATION OF A POCT |
|---|---|---|
Throat swabs (28 (77.8)); Urine, nasal swabs, sputum, capillary blood and exhaled breath (20 (>55)); 31 (88.6) of respondents would consider a test that required a breath sample | Faecal samples (31 (88.66)) Induced sputum (27 (84.4)) Venous blood (11 (31.4)) | |
The ability to use approximate volumes and a single preparation step (26 (74.3)); Not prone to contamination and no safety containment issues (25 (75.3) and 21 (61.8)) | Requires >3 preparation steps (27 (84.4)); Requires >2 preparation steps (19 (59.4); Highly sensitive to contamination (22 (66.7)) | |
Stability at room temperature (36 (100)); Minimum shelf life of 12 months (23 (63.9)) | Shelf life of less than 6 months (17 (50)); Unstable at room temperature (11 (32.4)); | |
Totally self-contained kit (30 (85.7)); No calibration required (20 (57.1)); Needs to contain the specimen collection device (15 (42.9)) | Requires calibration before each test (19 (59.4)); Does not contain the specimen collection device (15 (45.5)); Kit not totally self-contained (13 (37.1)) | |
All controls must be included as part of the kit (26 (74.3)); No need for external quality control (22 (62.9)); Needs to include controls within the kit (12 (34.3)); | External quality control needed 18 (54.5)); Kit does not include controls (18 (52.9)); Kit does not include controls as part of each test (15 (48.4)) | |
The instrument must be robust (24 (66.7)); No maintenance required, fits into a small area, and hand-held (> 21(61.8%)) for each specification) | Requires separate containment area (27 (77.1%)); Requires monthly maintenance (24 (68.6%)); Fragile (22 (62.9)) | |
Easy to read (31 (86.1)); Connectivity enabling downloading of results to patient records (25 (69.4)); Unambiguous results, a simple yes/no/invalid readout and readable for at least an hour (>20 61.8%) for each specification) | Ambiguous results (28 (82.4)); Complex to read (22 (62.9)); Does not allow automatic download to patient record (4 (11.8)). | |
Test can be performed by any healthcare worker without training (24 (70.6); Training time of one day maximum (22 (64.7)); Self-administration by patients (11 (32.4)) | Requires more than one day training (25 (71.4)); Can only be performed by an experience healthcare worker (11 (31.4)) | |
Powered by battery (30 (88.2)); Standard mains (27 (79.4)) | Could not be powered by standard mains (7 (20.6)); Could not be powered by battery (4 (11.8)) | |
No more than €10 (25 (73.5)); No more than €20 (11 (32.4) | NA | |
<€1,000 (20 (58.8)); €5,000 (9 (26.5)); No cost (14 (41.2)) | NA |
The diagnostic product specification statement.
A POCT to enhance the initial clinical management of suspected CAP in adult patients presenting in primary care. The POCT should achieve this by indicating with sufficient precision the presence or absence of the organisms that account for almost all cases of CAP, so as to inform decisions about whether an immediate antibiotic prescription is necessary or not. The primary target population is in primary care. The POCT should be easy to use by a range of health care professionals in a variety of settings (e.g. doctors, nurses and any community health workers in any primary care setting doctors surgery, GP home visit, and nursing homes). The POCT should be feasible and cost effective in the primary care setting. The test is designed to be used with either nasopharyngeal (NP) swab or exhaled breath samples without need for prior culture. |
The POCT should be able to detect The POCT should be able to detect penicillin and macrolide resistance in common potentially pathogenic respiratory bacteria. The POCT should provide a technologically flexible platform that allows the future incorporation of biomarker detection, should biomarkers be identified that will add to diagnostic performance. |
A POCT to identify S. pneumoniae, H. influenzae, S. aureus, M. catharralis, C. pneumoniae, M. pneumoniae, Legionella spp and common viral respiratory pathogens including rhinovirus, influenza A and B, coronaviruses, human metapneumoviruses, respiratory syncytial virus (RSV), and para-influenza. The results of the POCT should be used to accurately identify the presence of common pathogenic respiratory bacteria and viruses in adult patients presenting with symptoms of CA-LRTI, to rapidly guide clinicians in their decisions whether or not to prescribe antibiotic or antiviral treatment. |