Literature DB >> 30048043

Structural studies reveal the molecular mechanism of PETase.

Chun-Chi Chen1, Xu Han2, Tzu-Ping Ko3, Weidong Liu1,2, Rey-Ting Guo1,2.   

Abstract

Poly(ethylene terephthalate) (PET) is a class of plastic material widely used in modern society, but large amounts of PET waste cause severe environmental problems. Obtained from a PET-consuming bacterium Ideonella sakaiensis, the enzyme PETase exhibits superb hydrolytic activity and substrate preference toward PET. Here, we summarize some recent advances in the crystallographic analysis of PETase. These reports uncover structural features of PETase that are involved in its catalytic activity. In comparison to homologous enzymes, PETase contains an additional disulfide bond as well as an extended β8-α6 loop. More importantly, the crystal structures of PETase in complex with substrate and product analogs provide critical information for understanding the mechanism of action of PETase. In particular, the wobbling conformation of W156 is closely related to the binding of substrate and product. These new findings are of great importance for further in-depth research and engineering development of PETase, and should advance the implementation of plastic biodegradation strategy.
© 2018 Federation of European Biochemical Societies.

Entities:  

Keywords:  PET hydrolase; X-ray; biodegradation; plastic; protein crystallography

Mesh:

Substances:

Year:  2018        PMID: 30048043     DOI: 10.1111/febs.14612

Source DB:  PubMed          Journal:  FEBS J        ISSN: 1742-464X            Impact factor:   5.542


  19 in total

Review 1.  Emerging Roles of PETase and MHETase in the Biodegradation of Plastic Wastes.

Authors:  Writtik Maity; Subhasish Maity; Soumen Bera; Amrita Roy
Journal:  Appl Biochem Biotechnol       Date:  2021-04-01       Impact factor: 2.926

2.  Secretory production of an engineered cutinase in Bacillus subtilis for efficient biocatalytic depolymerization of polyethylene terephthalate.

Authors:  Yu-Ri Oh; Young-Ah Jang; Jae Kwang Song; Gyeong Tae Eom
Journal:  Bioprocess Biosyst Eng       Date:  2022-01-17       Impact factor: 3.210

Review 3.  Mechanism-Based Design of Efficient PET Hydrolases.

Authors:  Ren Wei; Gerlis von Haugwitz; Lara Pfaff; Jan Mican; Christoffel P S Badenhorst; Weidong Liu; Gert Weber; Harry P Austin; David Bednar; Jiri Damborsky; Uwe T Bornscheuer
Journal:  ACS Catal       Date:  2022-02-28       Impact factor: 13.084

4.  An NMR look at an engineered PET depolymerase.

Authors:  Cyril Charlier; Sabine Gavalda; Vinciane Borsenberger; Sophie Duquesne; Alain Marty; Vincent Tournier; Guy Lippens
Journal:  Biophys J       Date:  2022-07-06       Impact factor: 3.699

5.  Lessons From Insect Fungiculture: From Microbial Ecology to Plastics Degradation.

Authors:  Mariana O Barcoto; Andre Rodrigues
Journal:  Front Microbiol       Date:  2022-05-24       Impact factor: 6.064

Review 6.  A critical view on the technology readiness level (TRL) of microbial plastics biodegradation.

Authors:  Julio Cesar Soares Sales; Ariane Gaspar Santos; Aline Machado de Castro; Maria Alice Zarur Coelho
Journal:  World J Microbiol Biotechnol       Date:  2021-06-14       Impact factor: 3.312

7.  In silico Screening and Heterologous Expression of a Polyethylene Terephthalate Hydrolase (PETase)-Like Enzyme (SM14est) With Polycaprolactone (PCL)-Degrading Activity, From the Marine Sponge-Derived Strain Streptomyces sp. SM14.

Authors:  Eduardo L Almeida; Andrés Felipe Carrillo Rincón; Stephen A Jackson; Alan D W Dobson
Journal:  Front Microbiol       Date:  2019-10-01       Impact factor: 5.640

Review 8.  Microbial Polyethylene Terephthalate Hydrolases: Current and Future Perspectives.

Authors:  Clodagh M Carr; David J Clarke; Alan D W Dobson
Journal:  Front Microbiol       Date:  2020-11-11       Impact factor: 5.640

Review 9.  Enzymatic Remediation of Polyethylene Terephthalate (PET)-Based Polymers for Effective Management of Plastic Wastes: An Overview.

Authors:  Ankita Maurya; Amrik Bhattacharya; Sunil Kumar Khare
Journal:  Front Bioeng Biotechnol       Date:  2020-11-19

10.  Development of a Targeted Gene Disruption System in the Poly(Ethylene Terephthalate)-Degrading Bacterium Ideonella sakaiensis and Its Applications to PETase and MHETase Genes.

Authors:  Shin-Ichi Hachisuka; Tarou Nishii; Shosuke Yoshida
Journal:  Appl Environ Microbiol       Date:  2021-08-26       Impact factor: 4.792

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