Literature DB >> 3003683

SPLINT: a cubic spline interpolation program for the analysis of fragment sizes in one-dimensional electrophoresis gels.

C E Gariepy, M I Lomax, L I Grossman.   

Abstract

SPLINT (SPLine INTerpolation) is a BASIC microcomputer program that uses electrophoretic data on the migration distances of DNA fragments of known size to approximate the relationship between distance moved and DNA fragment size by a piecewise cubic spline function. This function places all standards exactly on the calibration curve and then determines from it the sizes of other fragments in the gel. Special advantages of this program include the use of a digitizer to enter the fragment positions directly from a gel photograph and the optional generation of a graph of the approximating function plus the placement on it of points from any specified gel lanes.

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Year:  1986        PMID: 3003683      PMCID: PMC339444          DOI: 10.1093/nar/14.1.575

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  17 in total

1.  Studies on the cleavage of bacteriophage lambda DNA with EcoRI Restriction endonuclease.

Authors:  M Thomas; R W Davis
Journal:  J Mol Biol       Date:  1975-01-25       Impact factor: 5.469

2.  Bent helical structure in kinetoplast DNA.

Authors:  J C Marini; S D Levene; D M Crothers; P T Englund
Journal:  Proc Natl Acad Sci U S A       Date:  1982-12       Impact factor: 11.205

3.  A restriction endonuclease cleavage map of mouse mitochondrial DNA.

Authors:  K H Moore; P H Johnson; S E Chandler; L I Grossman
Journal:  Nucleic Acids Res       Date:  1977       Impact factor: 16.971

4.  Analysis of endonuclease R-EcoRI fragments of DNA from lambdoid bacteriophages and other viruses by agarose-gel electrophoresis.

Authors:  R B Helling; H M Goodman; H W Boyer
Journal:  J Virol       Date:  1974-11       Impact factor: 5.103

5.  Molecular weight determination program.

Authors:  C V Maina; G P Nolan; A A Szalay
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

6.  Nucleotide sequence of bacteriophage lambda DNA.

Authors:  F Sanger; A R Coulson; G F Hong; D F Hill; G B Petersen
Journal:  J Mol Biol       Date:  1982-12-25       Impact factor: 5.469

7.  Apple software for analysis of the size of restriction fragments.

Authors:  J I Rood; J M Gawthorne
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

8.  Computer-based image analysis of one-dimensional electrophoretic gels used for the separation of DNA restriction fragments.

Authors:  A J Gray; D E Beecher; M V Olson
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

9.  GELYSIS: Pascal-implemented analysis of one-dimensional electrophoresis gels.

Authors:  P J Russell; R E Crandall; R Feinbaum
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

10.  DNAGEL: a computer program for determining DNA fragment sizes using a small computer equipped with a graphics tablet.

Authors:  T Kieser
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

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