Literature DB >> 3003680

A new method of representing DNA sequences which combines ease of visual analysis with machine readability.

J E Cowin, C H Jellis, D Rickwood.   

Abstract

A new method of representing DNA sequences has been devised which is termed stave projection. Compared with other formats for showing the base sequences of DNA, this method greatly enhances the ease of visual analysis of the sequences of bases and it is also in a machine readable form. Using this method it is possible to identify and annotate all of the functional features found in DNA sequences.

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Year:  1986        PMID: 3003680      PMCID: PMC339435          DOI: 10.1093/nar/14.1.509

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  3 in total

1.  A convenient and adaptable package of computer programs for DNA and protein sequence management, analysis and homology determination.

Authors:  J Pustell; F C Kafatos
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

2.  H curves, a novel method of representation of nucleotide series especially suited for long DNA sequences.

Authors:  E Hamori; J Ruskin
Journal:  J Biol Chem       Date:  1983-01-25       Impact factor: 5.157

3.  Machine-readable DNA sequences.

Authors:  R Lathe; R Findlay
Journal:  Nature       Date:  1984 Oct 18-24       Impact factor: 49.962

  3 in total
  1 in total

1.  Using a color-coded ambigraphic nucleic acid notation to visualize conserved palindromic motifs within and across genomes.

Authors:  David A Rozak; Anthony J Rozak
Journal:  BMC Genomics       Date:  2014-01-22       Impact factor: 3.969

  1 in total

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