| Literature DB >> 30026568 |
Tina Bagratuni1, Ioannis Ntanasis-Stathopoulos1, Maria Gavriatopoulou1, Nefeli Mavrianou-Koutsoukou1, Christine Liacos1, Dimitrios Patseas1, Nikolaos Kanellias1, Magdalini Migkou1, Dimitrios C Ziogas1, Evangelos Eleutherakis-Papaiakovou1, Maria Roussou1, Despina Fotiou1, Evangelos Terpos1, Efstathios Kastritis1, Meletios A Dimopoulos2.
Abstract
Liquid biopsyis being integrated into cancer diagnostics with profound therapeutic implications. However, its role in Waldenström's Macroglobulinemia (WM) and IgM monoclonal gammopathies is still unclear. In this study, we evaluated the role of peripheral blood (PB) cell-free DNA (cfDNA) in characterizing the mutational status of MYD88 and CXCR4 of patients with IgM monoclonal gammopathies. Paired bone marrow (BM) tumor DNA (tDNA) and PB cfDNA samples from 98 patients (9 MGUS, 45 with WM in remission, 44 with smoldering WM, newly diagnosed or relapsed WM) and 10 controls with non-IgM monoclonal gammopathies were analyzed. Regarding MYD88L265P mutation, 76 patients had paired tDNA and cfDNA informative samples. Among patients with WM in remission, 65% harbored the MYD88L265P mutation, whereas the corresponding percentage among smoldering/newly diagnosed or relapsed WM was 92%. The overall concordance rate was 94% (72/76). For CXCR4 mutations, 65 patients had paired informative tDNA and cfDNA samples. The overall concordance rate was 90% (59/65). All controls had wild-type MYD88 and CXCR4. In conclusion, PB cfDNA is a useful, minimally invasive, cost-effective, and time-effective tool for the identification of the presence of MYD88 and CXCR4 mutations in patients with IgM monoclonal gammopathies avoiding unnecessary BM assessment.Entities:
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Year: 2018 PMID: 30026568 PMCID: PMC6286389 DOI: 10.1038/s41375-018-0197-7
Source DB: PubMed Journal: Leukemia ISSN: 0887-6924 Impact factor: 11.528
Patient characteristics
| 98 | |
| IgM MGUS | 9 |
| Asymptomatic WM | 23 |
| Newly diagnosed symptomatic WM | 12 |
| WM in relapse | 9 |
| WM during Tx and in remission | 17 |
| WM post Tx | 28 |
| Kappa/Lamda | 79/19 |
| Age (median, range in years) | 72.5 (23–88) |
| Bone marrow infiltration (%; median, range) | 25 (0–90) |
| IgM levels (median, range in mg/dL) | 1260 (85–7810) |
| 10 | |
| Symptomatic MM ( | 5 |
| Smoldering MM ( | 2 |
| Non-IgM MGUS ( | 3 |
| Age (years; median, range) | 67 (57–81) |
IgM immunoglobulin M, WM Waldenström’s Macroglobulinemia, MM multiple myeloma, MGUS monoclonal gammopathy of undetermined significance, LC light chain
CXCR4 primers
| Name | Primer | Direction | Amplicon size (bp) |
|---|---|---|---|
| CXCR4_1 | 5′-ACTGGGTTAATGCTTGCTGA-3′ | F | 184 |
| 5′-TGCCCACCATCTACTCCATC-3′ | R | ||
| CXCR4_2 | 5′- GCCCACCATCTACTCCATCA-3′ | F | 158 |
| 5′-TGTCATCACGCTTCCCTTCT-3′ | R | ||
| CXCR4_3 | 5′-TGTCATCACGCTTCCCTTCT-3′ | F | 219 |
| 5′-AAGGTGGTCTATGTTGGCG-3′ | R | ||
| CXCR4_4 | 5′-AAGGTGGTCTATGTTGGCGT-3′ | F | 162 |
| 5′-TTCAGCACATCATGGTTGGC-3′ | R | ||
| CXCR4_5 | 5′-ATCTGTGACCGCTTCTACCC-3′ | F | 216 |
| 5′-CCTGTTGGCTGCCTTACTAC-3′ | R | ||
| CXCR4_6 | 5′-CTCATCCTGGCTTTCTTCGC-3′ | F | 173 |
| 5′-TGTTGTCTGAACCCCATCCT-3′ | R | ||
| CXCR4_7 | 5′-CATCCTCTATGCTTTCCTTGGAG-3′ | F | 171 |
| 5′-TCACTCCAGCTAACACAGATG-3′ | R |
Fig. 1AS-PCR and Sanger sequencing for MYD88 L265P in tDNA and cfDNA. WM1 and WM2 present in both wild-type and mutant products, while WM displays oonly the wild-type allele. WM1 and WM3 cfDNA sequencing analysis is also displayed
Fig. 2The sensitivity assessment of AS-PCR in cfDNA MYD88 wild-type and mutated product as seen on a 1.5% agarose-gel electrophoresis. Both the wild-type and the mutant alleles were detected to a dilution of 1%
Fig. 3Sanger sequencing of cfDNA and tDNA for mutations in CXCR4. WM5 is characterized by the pathogenic S338X mutation as displayed in both tDNA and cfDNA by the sequencing chromatogram
CXCR4 mutation predictions
| Mutation (Hg19) | Mutation (Hg38) | Gene | Provean number | Prediction | Reported SNP |
|---|---|---|---|---|---|
| P27T | P31T | CXCR4 | −2.986 | Deleterious | Not reported |
| F29L | F33L | CXCR4 | −0.778 | Neutral | Not reported |
| L50X | L54X | CXCR4 | Pathogenic | Not reported | |
| I53L | I57L | CXCR4 | −0.121 | Neutral | rs56400844 |
| V54G | V58G | CXCR4 | −4.11 | Deleterious | Not reported |
| V82G | V86G | CXCR4 | −5.5 | Deleterious | Not reported |
| V99G | V103G | CXCR4 | −1.952 | Neutral | Not reported |
| K110R | K114R | CXCR4 | −2.4 | Neutral | Not reported |
| L136Q | L140Q | CXCR4 | −5.5 | Deleterious | Not reported |
| H228Q | H232Q | CXCR4 | −0.306 | Neutral | rs762625278 |
| S338X | S342X | CXCR4 | Pathogenic | rs104893626 | |
| E343D | E347D | CXCR4 | −1.244 | Neutral | Not reported |
Rates of detection of MYD88L265P and of mutations in CXCR4 in CD19+-selected cells and in cfDNA, according to different disease states in 98 patients with monoclonal IgM
| CD19+ | cfDNA | CD19+ | cfDNA | |
|---|---|---|---|---|
| IgM MGUS | ( | ( | ( | ( |
| sWM | ( | ( | ( | ( |
| NDsWM | ( | ( | ( | ( |
| WM in relapse | ( | ( | ( | ( |
| WM during active therapy | ( | ( | ( | ( |
| WM post therapy | ( | ( | ( | ( |
| Overall | ( | ( | ( | ( |