| Literature DB >> 30022116 |
Michael Grover1,2, Paul R Bessell3, Anne Conan4, Pim Polak5, Claude T Sabeta6, Bjorn Reininghaus7, Darryn L Knobel8,9.
Abstract
We characterized the spatiotemporal epidemiology of rabies from January 2009 through March 2014 across the interface between a wildlife reserve and communal livestock farming area in South Africa. Brain tissue from 344 animals of 28 different species were tested for lyssavirus antigen. Of these, 146 (42.4%) samples tested positive, of which 141 (96.6%) came from dogs. Brain samples of dogs were more likely to test positive for lyssavirus antigen if they were found and destroyed in the reserve, compared to samples originating from dogs outside the reserve (65.3% vs. 45.5%; odds ratio (OR) = 2.26, 95% confidence interval (CI) = 1.27-4.03), despite rabies surveillance outside the reserve being targeted to dogs that have a higher index of suspicion due to clinical or epidemiological evidence of infection. In the reserve, dogs were more likely to test positive for rabies if they were shot further from villages (OR = 1.42, 95% CI 1.18-1.71) and closer to water points (OR = 0.41, 95% CI 0.21-0.81). Our results provide a basis for refinement of existing surveillance and control programs to mitigate the threat of spillover of rabies to wildlife populations.Entities:
Mesh:
Year: 2018 PMID: 30022116 PMCID: PMC6052038 DOI: 10.1038/s41598-018-29045-x
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Figure 1Map of the study reserve indicating the locations and rabies test status of 150 dogs shot from 1 January 2009 through 18 March 2014, along with other relevant spatial features. The map was created using ESRI ArcGIS 10.3 (www.esri.com). Data on protected areas are derived from OpenStreetMap© contributors under a Creative Commons Attribution-ShareAlike 2.0 licence (CC-BY-SA; https://creativecommons.org/licenses/by-sa/2.0/) (made available under the Open Database License: http://opendatacommons.org/licenses/odbl/1.0/. Any rights in individual contents of the database are licensed under the Database Contents License: http://opendatacommons.org/licenses/dbcl/1.0/). Data on administrative boundaries were obtained from the Global Administrative Areas database[22]. Village outlines were digitised by the authors from 1:50,000 topographic maps 2431CA, 2431CB, 2431 CC and 2431CD from the National Geospatial Information of South Africa [Copyright Chief Directorate: National Geospatial Information. Reproduced under Government Printer’s authorisation (Authorisation No. 11793) dated 07 June 2018]. All other data layers were produced and compiled by the authors.
Results of univariable and multivariable logistic regression analyses of distance (km) to spatial features and dog rabies test result.
| Predictor | Coefficient | Standard error | Odds ratio |
|---|---|---|---|
|
| |||
| Access roads | −0.375 | 0.118 | 0.69 (0.55–0.87) |
| Camps/lodges | −0.277 | 0.095 | 0.76 (0.63–0.92) |
| Fence | 0.519 | 0.171 | 1.68 (1.97–2.36) |
| Gates | −0.021 | 0.033 | 0.98 (0.92–1.04) |
| Major river | −0.129 | 0.004 | 0.88 (0.78–0.99) |
| Minor river | 0.187 | 0.270 | 1.21 (0.71–2.06) |
| Pickets | 0.249 | 0.081 | 1.28 (1.09–1.51) |
| Villages | 0.353 | 0.093 | 1.42 (1.18–1.71) |
| Vulnerable points | 0.424 | 0.145 | 1.52 (1.15–2.04) |
| Water points | −0.844 | 0.316 | 0.43 (0.23–0.80) |
|
| |||
| (Intercept) | 0.164 | 0.375 | |
| Villages | 0.351 | 0.093 | 1.42 (1.18–1.71) |
| Water points | −0.892 | 0.343 | 0.41 (0.21–0.81) |
Results of univariable analyses of distance (km) to spatial features and dog rabies test result, for dogs found more than 0.2 km from the fence.
| Predictor | Coefficient | Standard error | Odds ratio |
|---|---|---|---|
| Access roads | −0.285 | 0.314 | 0.75 (0.40–1.41) |
| Camps/lodges | −0.080 | 0.225 | 0.92 (0.59–1.45) |
| Fence | 0.387 | 0.190 | 1.47 (1.01–2.15) |
| Gates | 0.051 | 0.075 | 1.05 (0.91–1.22) |
| Major river | −0.176 | 0.113 | 0.84 (0.67–1.05) |
| Minor river | 0.499 | 0.445 | 1.65 (0.68–4.00) |
| Pickets | 0.201 | 0.132 | 1.22 (0.94–1.59) |
| Villages | 0.456 | 0.169 | 1.58 (1.13–2.21) |
| Vulnerable points | 0.385 | 0.191 | 1.47 (1.01–2.15) |
| Water points | 0.424 | 0.934 | 1.53 (0.24–9.83) |
Figure 2Number of dogs shot by month within the study site showing rabies test results, from 1 January 2009 through 31 December 2013. The blue line and secondary y-axis shows monthly rainfall totals. Indicators at the top of the graph show the status of the fence.
Figure 3Decomposition of time series for monthly dogs shot (top; a–d) and rabies positive dogs (bottom; e–h) from 1 January 2009 through 31 December 2013; (a,e) observed times series data, (b,f) generalized trend data over time, (c,g) modeled seasonal data of time series, and (d,h) modeled random time series data.