Literature DB >> 30021107

Direct Evidence for the Effect of Glycerol on Protein Hydration and Thermal Structural Transition.

Mitsuhiro Hirai1, Satoshi Ajito2, Masaaki Sugiyama3, Hiroki Iwase4, Shin-Ichi Takata5, Nobutaka Shimizu6, Noriyuki Igarashi6, Anne Martel7, Lionel Porcar7.   

Abstract

The mechanisms of protein stabilization by uncharged solutes, such as polyols and sugars, have been intensively studied with respect to the chemical thermodynamics of molecular crowding. In particular, many experimental and theoretical studies have been conducted to explain the mechanism of the protective action on protein structures by glycerol through the relationship between hydration and glycerol solvation on protein surfaces. We used wide-angle x-ray scattering (WAXS), small-angle neutron scattering, and theoretical scattering function simulation to quantitatively characterize the hydration and/or solvation shell of myoglobin in aqueous solutions of up to 75% v/v glycerol. At glycerol concentrations below ∼40% v/v, the preservation of the hydration shell was dominant, which was reasonably explained by the preferential exclusion of glycerol from the protein surface (preferential hydration). In contrast, at concentrations above 50% v/v, the partial penetration or replacement of glycerol into or with hydration-shell water (neutral solvation by glycerol) was gradually promoted. WAXS results quantitatively demonstrated the neutral solvation, in which the replacement of hydrated water by glycerol was proportional to the volume fraction of glycerol in the solvent multiplied by an exchange rate (β ≤ 1). These phenomena were confirmed by small-angle neutron scattering measurements. The observed WAXS data covered the entire hierarchical structure of myoglobin, ranging from tertiary to secondary structures. We separately analyzed the effect of glycerol on the thermal stability of myoglobin at each hierarchical structural level. The thermal transition midpoint temperature at each hierarchical structural level was raised depending on the glycerol concentration, with enhanced transition cooperativeness between different hierarchical structural levels. The onset temperature of the helix-to-cross β-sheet transition (the initial process of amyloid formation) was evidently elevated. However, oligomerization connected to fibril formation was suppressed, even at a low glycerol concentration.
Copyright © 2018 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2018        PMID: 30021107      PMCID: PMC6050752          DOI: 10.1016/j.bpj.2018.06.005

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  37 in total

1.  Protein folding, stability, and solvation structure in osmolyte solutions.

Authors:  Jörg Rösgen; B Montgomery Pettitt; David Wayne Bolen
Journal:  Biophys J       Date:  2005-08-19       Impact factor: 4.033

2.  Effect of protein-encapsulation on thermal structural stability of liposome composed of glycosphingolipid/cholesterol/phospholipid.

Authors:  Mitsuhiro Hirai; Shoki Sato; Ryota Kimura; Yoshihiko Hagiwara; Rika Kawai-Hirai; Noboru Ohta; Noriyuki Igarashi; Nobutaka Shimizu
Journal:  J Phys Chem B       Date:  2015-02-12       Impact factor: 2.991

3.  Molecular anatomy of preferential interaction coefficients by elucidating protein solvation in mixed solvents: methodology and application for lysozyme in aqueous glycerol.

Authors:  Vincent Vagenende; Miranda G S Yap; Bernhardt L Trout
Journal:  J Phys Chem B       Date:  2009-08-27       Impact factor: 2.991

4.  A myoglobin variant with a polar substitution in a conserved hydrophobic cluster in the heme binding pocket.

Authors:  R Maurus; C M Overall; R Bogumil; Y Luo; A G Mauk; M Smith; G D Brayer
Journal:  Biochim Biophys Acta       Date:  1997-08-15

5.  Thermodynamic and kinetic examination of protein stabilization by glycerol.

Authors:  K Gekko; S N Timasheff
Journal:  Biochemistry       Date:  1981-08-04       Impact factor: 3.162

6.  Dynamics of water interacting with interfaces, molecules, and ions.

Authors:  Michael D Fayer
Journal:  Acc Chem Res       Date:  2011-03-18       Impact factor: 22.384

7.  Protein crowding affects hydration structure and dynamics.

Authors:  Ryuhei Harada; Yuji Sugita; Michael Feig
Journal:  J Am Chem Soc       Date:  2012-03-02       Impact factor: 15.419

8.  Determination of asymmetric structure of ganglioside-DPPC mixed vesicle using SANS, SAXS, and DLS.

Authors:  Mitsuhiro Hirai; Hiroki Iwase; Tomohiro Hayakawa; Masaharu Koizumi; Hiroshi Takahashi
Journal:  Biophys J       Date:  2003-09       Impact factor: 4.033

9.  Internal protein motions, concentrated glycerol, and hydrogen exchange studied in myoglobin.

Authors:  D B Calhoun; S W Englander
Journal:  Biochemistry       Date:  1985-04-09       Impact factor: 3.162

10.  Investigation of cosolute-protein preferential interaction coefficients: new insight into the mechanism by which arginine inhibits aggregation.

Authors:  Curtiss P Schneider; Bernhardt L Trout
Journal:  J Phys Chem B       Date:  2009-02-19       Impact factor: 2.991

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  2 in total

1.  Effects of low-molecular-weight polyols on the hydration status of the light-harvesting complex 2 from Rhodobacter sphaeroides 2.4.1.

Authors:  Ying Shi; Jie Yu; Yu-Chen Liu; Peng Wang; Jian-Ping Zhang
Journal:  Photochem Photobiol Sci       Date:  2021-04-28       Impact factor: 3.982

2.  Short-Distance Intermolecular Correlations of Mono- and Disaccharides in Condensed Solutions: Bulky Character of Trehalose.

Authors:  Mitsuhiro Hirai; Satoshi Ajito; Tatsuo Iwasa; Durige Wen; Noriyuki Igarashi; Nobutaka Shimizu
Journal:  ACS Omega       Date:  2020-05-05
  2 in total

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