Literature DB >> 30013283

Rapid Detection Device for Salmonella typhi in Milk, Juice, Water and Calf Serum.

Avinash Kaur1, Ritu Das1, Mayank Rai Nigam1, Ravikrishnan Elangovan2, Deepal Pandya3, Sandeep Jha4,5, Dinesh Kalyanasundaram1,5.   

Abstract

A limit of detection of 200 CFU/mL of Salmonella typhi spiked in various sample matrices were achieved in 30 min. The sample matrices were raw/unprocessed milk, commercially available milk, juice from packed bottles, fresh juice from carts, potable water, turbid water and calf serum. The complete protocol comprised of three steps: (a) cell lysis (b) nucleic acid amplification and (c) an in situ optical detection. The cell lysis was carried out using a simple heating based protocol, while the loop-mediated isothermal amplification of DNA was carried out by an in-house designed and fabricated system. The developed system consists of an aluminum block fitted with two cartridge heaters along with a thermocouple. The system was coupled to a light source and spectrometer for a simultaneous in situ detection. Primers specific for STY2879 gene were used to amplify the nucleic acid sequence, isolated from S. typhi cells. The protocol involves 15 min of cell lysis and DNA isolation followed by 15 min for isothermal amplification and simultaneous detection. No cross-reactivity of the primers were observed at 106 CFU/mL of Escherichia coli, Vibrio cholerae, Salmonella typhimurium, Salmonella paratyphi A, Pseudomonas aeruginosa, Bacillus cereus, Lysteria monocytogenes, Clostridium botulinum, Staphylococcus aureus and Salmonella havana. In addition, the system was able to detect S. typhi of 200 CFU/mL in a concoction of 106 CFU/mL of E. coli, 106 CFU/mL of V. cholerae, and 106 CFU/mL of hepatocyte-derived cellular carcinoma HUH7 cells. The proposed rapid diagnostic system shows a promising future in the field of food and medical diagnostics.

Entities:  

Keywords:  Calf serum; Fruit juice; Loop-mediated isothermal amplification (LAMP); Milk; Optical detection; Rapid detection; Raw/unprocessed milk; Salmonella typhi; Tap water; Turbid water

Year:  2018        PMID: 30013283      PMCID: PMC6023822          DOI: 10.1007/s12088-018-0730-4

Source DB:  PubMed          Journal:  Indian J Microbiol        ISSN: 0046-8991            Impact factor:   2.461


  21 in total

1.  Loop-mediated isothermal amplification of DNA.

Authors:  T Notomi; H Okayama; H Masubuchi; T Yonekawa; K Watanabe; N Amino; T Hase
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

2.  Genome Wide Analysis for Searching Novel Markers to Rapidly Identify Clostridium Strains.

Authors:  Anay Kekre; Ashish Bhushan; Prasun Kumar; Vipin Chandra Kalia
Journal:  Indian J Microbiol       Date:  2015-05-14       Impact factor: 2.461

Review 3.  Loop-mediated isothermal amplification (LAMP): principle, features, and future prospects.

Authors:  Tsugunori Notomi; Yasuyoshi Mori; Norihiro Tomita; Hidetoshi Kanda
Journal:  J Microbiol       Date:  2015-01-04       Impact factor: 3.422

4.  ELIME assay vs Real-Time PCR and conventional culture method for an effective detection of Salmonella in fresh leafy green vegetables.

Authors:  L Fabiani; E Pucci; E Delibato; G Volpe; S Piermarini; D De Medici; F Capuano; G Palleschi
Journal:  Talanta       Date:  2017-01-27       Impact factor: 6.057

5.  Highly sensitive detection of Salmonella typhi using surface aminated polycarbonate membrane enhanced-ELISA.

Authors:  Swati Jain; Sruti Chattopadhyay; Richa Jackeray; C K V Zainul Abid; Guneet Singh Kohli; Harpal Singh
Journal:  Biosens Bioelectron       Date:  2011-10-14       Impact factor: 10.618

6.  Real-time nucleic acid sequence-based amplification (NASBA) assay targeting MIC1 for detection of Cryptosporidium parvum and Cryptosporidium hominis oocysts.

Authors:  Birgitte K Hønsvall; Lucy J Robertson
Journal:  Exp Parasitol       Date:  2016-12-18       Impact factor: 2.011

7.  A rapid assay for detection of Rose rosette virus using reverse transcription-recombinase polymerase amplification using multiple gene targets.

Authors:  Binoy Babu; Brian K Washburn; Steven H Miller; Kristina Poduch; Tulin Sarigul; Gary W Knox; Francisco M Ochoa-Corona; Mathews L Paret
Journal:  J Virol Methods       Date:  2016-11-30       Impact factor: 2.014

8.  A Genome-Wide Profiling Strategy as an Aid for Searching Unique Identification Biomarkers for Streptococcus.

Authors:  Vipin Chandra Kalia; Ravi Kumar; Prasun Kumar; Shikha Koul
Journal:  Indian J Microbiol       Date:  2015-11-20       Impact factor: 2.461

9.  Structure based in silico analysis of quinolone resistance in clinical isolates of Salmonella Typhi from India.

Authors:  Manoj Kumar; Sushila Dahiya; Priyanka Sharma; Sujata Sharma; Tej P Singh; Arti Kapil; Punit Kaur
Journal:  PLoS One       Date:  2015-05-11       Impact factor: 3.240

10.  Detection and identification of enterohemorrhagic Escherichia coli O157:H7 and Vibrio cholerae O139 using oligonucleotide microarray.

Authors:  Da-Zhi Jin; Xiao-Jing Xu; Su-Hong Chen; Si-Yuan Wen; Xue-En Ma; Zheng Zhang; Feng Lin; Sheng-Qi Wang
Journal:  Infect Agent Cancer       Date:  2007-12-23       Impact factor: 2.965

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