Literature DB >> 30012515

Probing membrane protein ground and conformationally excited states using dipolar- and J-coupling mediated MAS solid state NMR experiments.

T Gopinath1, Gianluigi Veglia2.   

Abstract

The intrinsic conformational plasticity of membrane proteins directly influences the magnitude of the orientational-dependent NMR interactions such as dipolar couplings (DC) and chemical shift anisotropy (CSA). As a result, the conventional cross-polarization (CP)-based techniques mainly capture the more rigid regions of membrane proteins, while the most dynamic regions are essentially invisible. Nonetheless, dynamic regions can be detected using experiments in which polarization transfer takes place via J-coupling interactions. Here, we review our recent efforts to develop single and dual acquisition pulse sequences with either 1H or 13C detection that utilize both DC and J-coupling mediated transfer to detect both rigid and mobile regions of membrane proteins in native-like lipid environments. We show the application of these new methods for studying the conformational equilibrium of a single-pass membrane protein, phospholamban, which regulates the calcium transport across the sarcoplasmic reticulum (SR) membrane by interacting with the SR Ca2+-ATPase. We anticipate that these methods will be ideal to portray the complex dynamics of membrane proteins in their native environments.
Copyright © 2018. Published by Elsevier Inc.

Entities:  

Keywords:  (1)H detection; Conformationally excited states; INEPT-HETCOR; Magic angle spinning; Membrane proteins; Phospholamban; RI-HSQC; RI-TOBSY; SERI-HSQC; Solid-State NMR; rINEPT

Mesh:

Substances:

Year:  2018        PMID: 30012515      PMCID: PMC6428079          DOI: 10.1016/j.ymeth.2018.07.003

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  8 in total

1.  Intrinsically disordered HAX-1 regulates Ca2+ cycling by interacting with lipid membranes and the phospholamban cytoplasmic region.

Authors:  Erik K Larsen; Daniel K Weber; Songlin Wang; Tata Gopinath; Daniel J Blackwell; Michael P Dalton; Seth L Robia; Jiali Gao; Gianluigi Veglia
Journal:  Biochim Biophys Acta Biomembr       Date:  2019-08-07       Impact factor: 3.747

2.  Surface-Binding to Cardiolipin Nanodomains Triggers Cytochrome c Pro-apoptotic Peroxidase Activity via Localized Dynamics.

Authors:  Mingyue Li; Abhishek Mandal; Vladimir A Tyurin; Maria DeLucia; Jinwoo Ahn; Valerian E Kagan; Patrick C A van der Wel
Journal:  Structure       Date:  2019-03-14       Impact factor: 5.006

3.  An intramembrane sensory circuit monitors sortase A-mediated processing of streptococcal adhesins.

Authors:  Jeffrey W Hall; Bruno P Lima; Gaetan G Herbomel; Tata Gopinath; LeAnna McDonald; Michael T Shyne; John K Lee; Jens Kreth; Karen F Ross; Gianluigi Veglia; Mark C Herzberg
Journal:  Sci Signal       Date:  2019-05-07       Impact factor: 8.192

Review 4.  Advances in studying protein disorder with solid-state NMR.

Authors:  Ansgar B Siemer
Journal:  Solid State Nucl Magn Reson       Date:  2020-01-12       Impact factor: 2.293

5.  Proton-detected polarization optimized experiments (POE) using ultrafast magic angle spinning solid-state NMR: Multi-acquisition of membrane protein spectra.

Authors:  T Gopinath; Gianluigi Veglia
Journal:  J Magn Reson       Date:  2019-11-28       Impact factor: 2.229

6.  Multi-receiver solid-state NMR using polarization optimized experiments (POE) at ultrafast magic angle spinning.

Authors:  T Gopinath; Daniel K Weber; Gianluigi Veglia
Journal:  J Biomol NMR       Date:  2020-04-24       Impact factor: 2.835

7.  A kink in DWORF helical structure controls the activation of the sarcoplasmic reticulum Ca2+-ATPase.

Authors:  U Venkateswara Reddy; Daniel K Weber; Songlin Wang; Erik K Larsen; Tata Gopinath; Alfonso De Simone; Seth Robia; Gianluigi Veglia
Journal:  Structure       Date:  2021-12-06       Impact factor: 5.006

Review 8.  In-cell Solid-State NMR Studies of Antimicrobial Peptides.

Authors:  Frances Separovic; David W Keizer; Marc-Antoine Sani
Journal:  Front Med Technol       Date:  2020-12-17
  8 in total

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