Literature DB >> 30007417

The Chara Genome: Secondary Complexity and Implications for Plant Terrestrialization.

Tomoaki Nishiyama1, Hidetoshi Sakayama2, Jan de Vries3, Henrik Buschmann4, Denis Saint-Marcoux5, Kristian K Ullrich6, Fabian B Haas6, Lisa Vanderstraeten7, Dirk Becker8, Daniel Lang9, Stanislav Vosolsobě10, Stephane Rombauts11, Per K I Wilhelmsson6, Philipp Janitza12, Ramona Kern13, Alexander Heyl14, Florian Rümpler15, Luz Irina A Calderón Villalobos16, John M Clay17, Roman Skokan10, Atsushi Toyoda18, Yutaka Suzuki19, Hiroshi Kagoshima20, Elio Schijlen21, Navindra Tajeshwar14, Bruno Catarino22, Alexander J Hetherington22, Assia Saltykova23, Clemence Bonnot22, Holger Breuninger24, Aikaterini Symeonidi6, Guru V Radhakrishnan25, Filip Van Nieuwerburgh26, Dieter Deforce26, Caren Chang17, Kenneth G Karol27, Rainer Hedrich8, Peter Ulvskov28, Gernot Glöckner29, Charles F Delwiche17, Jan Petrášek10, Yves Van de Peer30, Jiri Friml31, Mary Beilby32, Liam Dolan22, Yuji Kohara20, Sumio Sugano19, Asao Fujiyama18, Pierre-Marc Delaux33, Marcel Quint34, Günter Theißen15, Martin Hagemann13, Jesper Harholt35, Christophe Dunand33, Sabine Zachgo4, Jane Langdale22, Florian Maumus36, Dominique Van Der Straeten7, Sven B Gould37, Stefan A Rensing38.   

Abstract

Land plants evolved from charophytic algae, among which Charophyceae possess the most complex body plans. We present the genome of Chara braunii; comparison of the genome to those of land plants identified evolutionary novelties for plant terrestrialization and land plant heritage genes. C. braunii employs unique xylan synthases for cell wall biosynthesis, a phragmoplast (cell separation) mechanism similar to that of land plants, and many phytohormones. C. braunii plastids are controlled via land-plant-like retrograde signaling, and transcriptional regulation is more elaborate than in other algae. The morphological complexity of this organism may result from expanded gene families, with three cases of particular note: genes effecting tolerance to reactive oxygen species (ROS), LysM receptor-like kinases, and transcription factors (TFs). Transcriptomic analysis of sexual reproductive structures reveals intricate control by TFs, activity of the ROS gene network, and the ancestral use of plant-like storage and stress protection proteins in the zygote.
Copyright © 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Chara; Phragmoplastophyta; charophyte; phragmoplast; phytohormones; plant evolution; reactive oxygen species; streptophyte; transcriptional regulation

Mesh:

Substances:

Year:  2018        PMID: 30007417     DOI: 10.1016/j.cell.2018.06.033

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  91 in total

1.  Age and site-specific pattern on encrustation of charophytes.

Authors:  Anne Herbst; Hendrik Schubert
Journal:  Bot Stud       Date:  2018-12-19       Impact factor: 2.787

2.  Red and blue light differentially impact retrograde signalling and photoprotection in rice.

Authors:  Liu Duan; M Águila Ruiz-Sola; Ana Couso; Nil Veciana; Elena Monte
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-05-04       Impact factor: 6.237

3.  Jasmonate-Related MYC Transcription Factors Are Functionally Conserved in Marchantia polymorpha.

Authors:  María Peñuelas; Isabel Monte; Fabian Schweizer; Armelle Vallat; Philippe Reymond; Gloria García-Casado; Jose M Franco-Zorrilla; Roberto Solano
Journal:  Plant Cell       Date:  2019-08-07       Impact factor: 11.277

4.  Convergence of sphingolipid desaturation across over 500 million years of plant evolution.

Authors:  Hanno Christoph Resemann; Cornelia Herrfurth; Kirstin Feussner; Ellen Hornung; Anna K Ostendorf; Jasmin Gömann; Jennifer Mittag; Nico van Gessel; Jan de Vries; Jutta Ludwig-Müller; Jennifer Markham; Ralf Reski; Ivo Feussner
Journal:  Nat Plants       Date:  2021-01-25       Impact factor: 15.793

Review 5.  Charting the genomic landscape of seed-free plants.

Authors:  Péter Szövényi; Andika Gunadi; Fay-Wei Li
Journal:  Nat Plants       Date:  2021-04-05       Impact factor: 15.793

6.  Massive Tandem Proliferation of ELIPs Supports Convergent Evolution of Desiccation Tolerance across Land Plants.

Authors:  Robert VanBuren; Jeremy Pardo; Ching Man Wai; Sterling Evans; Dorothea Bartels
Journal:  Plant Physiol       Date:  2019-01-02       Impact factor: 8.340

Review 7.  The Moss Physcomitrium (Physcomitrella) patens: A Model Organism for Non-Seed Plants.

Authors:  Stefan A Rensing; Bernard Goffinet; Rabea Meyberg; Shu-Zon Wu; Magdalena Bezanilla
Journal:  Plant Cell       Date:  2020-03-09       Impact factor: 11.277

8.  Major components of the KARRIKIN INSENSITIVE2-dependent signaling pathway are conserved in the liverwort Marchantia polymorpha.

Authors:  Yohei Mizuno; Aino Komatsu; Shota Shimazaki; Satoshi Naramoto; Keisuke Inoue; Xiaonan Xie; Kimitsune Ishizaki; Takayuki Kohchi; Junko Kyozuka
Journal:  Plant Cell       Date:  2021-08-13       Impact factor: 11.277

9.  Anthoceros genomes illuminate the origin of land plants and the unique biology of hornworts.

Authors:  Fay-Wei Li; Tomoaki Nishiyama; Manuel Waller; Eftychios Frangedakis; Jean Keller; Zheng Li; Noe Fernandez-Pozo; Michael S Barker; Tom Bennett; Miguel A Blázquez; Shifeng Cheng; Andrew C Cuming; Jan de Vries; Sophie de Vries; Pierre-Marc Delaux; Issa S Diop; C Jill Harrison; Duncan Hauser; Jorge Hernández-García; Alexander Kirbis; John C Meeks; Isabel Monte; Sumanth K Mutte; Anna Neubauer; Dietmar Quandt; Tanner Robison; Masaki Shimamura; Stefan A Rensing; Juan Carlos Villarreal; Dolf Weijers; Susann Wicke; Gane K-S Wong; Keiko Sakakibara; Péter Szövényi
Journal:  Nat Plants       Date:  2020-03-13       Impact factor: 15.793

Review 10.  The hornworts: morphology, evolution and development.

Authors:  Eftychios Frangedakis; Masaki Shimamura; Juan Carlos Villarreal; Fay-Wei Li; Marta Tomaselli; Manuel Waller; Keiko Sakakibara; Karen S Renzaglia; Péter Szövényi
Journal:  New Phytol       Date:  2020-09-15       Impact factor: 10.151

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