Literature DB >> 2999774

Polymorphism and evolution of Alu sequences in the human low density lipoprotein receptor gene.

H H Hobbs, M A Lehrman, T Yamamoto, D W Russell.   

Abstract

Two clusters of Alu sequences in the human low density lipoprotein (LDL) receptor gene have been analyzed in detail. One Alu cluster is present within the intron separating exons 15 and 16 of the gene and contains a polymorphic Pvu II site. The presence or absence of this site gives rise to two allelic fragments of 14 and 16.5 kilobases, respectively, in genomic Southern blots using cloned cDNA probes. This DNA polymorphic site is caused by a single adenine to guanine transition within an Alu repetitive element. The second cluster of Alu sequences is located in exon 18 of the LDL receptor gene. Southern blotting of primate DNAs suggests that this cluster became associated with the gene about 30 million years ago. Comparison of bovine DNA sequences, which lack this Alu cluster, with those of the human indicates that the Alu sequences inserted in exon 18 in two independent events.

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Year:  1985        PMID: 2999774      PMCID: PMC391391          DOI: 10.1073/pnas.82.22.7651

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  22 in total

1.  Identification of a nondeletion defect in alpha-thalassemia.

Authors:  Y W Kan; A M Dozy; R Trecartin; D Todd
Journal:  N Engl J Med       Date:  1977-11-17       Impact factor: 91.245

Review 2.  Short interspersed repetitive DNA elements in eucaryotes: transposable DNA elements generated by reverse transcription of RNA pol III transcripts?

Authors:  P Jagadeeswaran; B G Forget; S M Weissman
Journal:  Cell       Date:  1981-10       Impact factor: 41.582

3.  Base sequence studies of 300 nucleotide renatured repeated human DNA clones.

Authors:  P L Deininger; D J Jolly; C M Rubin; T Friedmann; C W Schmid
Journal:  J Mol Biol       Date:  1981-09-05       Impact factor: 5.469

4.  Transposable elements.

Authors:  M P Calos; J H Miller
Journal:  Cell       Date:  1980-07       Impact factor: 41.582

5.  Polymorphism near the rat prolactin gene caused by insertion of an Alu-like element.

Authors:  L A Schuler; J L Weber; J Gorski
Journal:  Nature       Date:  1983 Sep 8-14       Impact factor: 49.962

Review 6.  Repetitive sequences in eukaryotic DNA and their expression.

Authors:  W R Jelinek; C W Schmid
Journal:  Annu Rev Biochem       Date:  1982       Impact factor: 23.643

7.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

8.  The LDL receptor gene: a mosaic of exons shared with different proteins.

Authors:  T C Südhof; J L Goldstein; M S Brown; D W Russell
Journal:  Science       Date:  1985-05-17       Impact factor: 47.728

9.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

10.  Recombination and balanced chromosome polymorphism suggested by DNA sequences 5' to the human delta-globin gene.

Authors:  N Maeda; J B Bliska; O Smithies
Journal:  Proc Natl Acad Sci U S A       Date:  1983-08       Impact factor: 11.205

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  21 in total

Review 1.  The use of recombinant DNA techniques for the diagnosis of familial hypercholesterolaemia.

Authors:  S Humphries; R Taylor; M Jeenah; M Seed
Journal:  J Inherit Metab Dis       Date:  1988       Impact factor: 4.982

2.  A genetic map of bovine chromosome 7 with an interspecific hybrid backcross panel.

Authors:  Q Gao; J E Womack
Journal:  Mamm Genome       Date:  1997-04       Impact factor: 2.957

3.  Lucky, times ten: A career in Texas science.

Authors:  David W Russell
Journal:  J Biol Chem       Date:  2018-12-07       Impact factor: 5.157

4.  Multiple crm- mutations in familial hypercholesterolemia. Evidence for 13 alleles, including four deletions.

Authors:  H H Hobbs; E Leitersdorf; J L Goldstein; M S Brown; D W Russell
Journal:  J Clin Invest       Date:  1988-03       Impact factor: 14.808

5.  DNA markers in primate models of human disease.

Authors:  J E Hixson
Journal:  Genetica       Date:  1987-08-31       Impact factor: 1.082

6.  AvaII polymorphism in the human LDL receptor gene.

Authors:  H H Hobbs; V Esser; D W Russell
Journal:  Nucleic Acids Res       Date:  1987-01-12       Impact factor: 16.971

7.  A DNA probe for the LDL receptor gene is tightly linked to hypercholesterolemia in a pedigree with early coronary disease.

Authors:  M F Leppert; S J Hasstedt; T Holm; P O'Connell; L Wu; O Ash; R R Williams; R White
Journal:  Am J Hum Genet       Date:  1986-09       Impact factor: 11.025

8.  Human genes involved in cholesterol metabolism: chromosomal mapping of the loci for the low density lipoprotein receptor and 3-hydroxy-3-methylglutaryl-coenzyme A reductase with cDNA probes.

Authors:  V Lindgren; K L Luskey; D W Russell; U Francke
Journal:  Proc Natl Acad Sci U S A       Date:  1985-12       Impact factor: 11.205

9.  Familial hypercholesterolemia in South African Afrikaners. PvuII and StuI DNA polymorphisms in the LDL-receptor gene consistent with a predominating founder gene effect.

Authors:  P A Brink; L T Steyn; G A Coetzee; D R Van der Westhuyzen
Journal:  Hum Genet       Date:  1987-09       Impact factor: 4.132

10.  Human Tcrb-V6.10 is a pseudogene with Alu repetitive sequences in the promoter region.

Authors:  Y Li; A Wong; P Szabo; D N Posnett
Journal:  Immunogenetics       Date:  1993       Impact factor: 2.846

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