| Literature DB >> 29996772 |
Zhimin Liu1, Zhifeng Zhang1, Mei Huang1, Xiaoping Sun2, Bojia Liu1, Qiyang Guo1, Qingshan Chang2, Zhijun Duan3.
Abstract
BACKGROUND: Previous studies have indicated that bile acid is associated with progression of liver cirrhosis. However, the particular role of specific bile acid in the development of liver cirrhosis is not definite. The present study aims to identify the specific bile acid and explore its possible mechanisms in promoting liver cirrhosis.Entities:
Keywords: Hepatic stellate cell; Liver cirrhosis; Metabolomics; Taurocholic acid
Mesh:
Substances:
Year: 2018 PMID: 29996772 PMCID: PMC6042259 DOI: 10.1186/s12876-018-0842-7
Source DB: PubMed Journal: BMC Gastroenterol ISSN: 1471-230X Impact factor: 3.067
Characteristics of liver cirrhotic patients and healthy controls
| Liver cirrhosis | Healthy control |
| |
|---|---|---|---|
| Male/Female | 18/14 | 9/18 | 0.134 |
| Age(years) | 59.00 ± 12.92 | 51.78 ± 18.99 | 0.089 |
| Child Pugh class A | 12 | – | – |
| Child Pugh class B | 17 | – | – |
| Child Pugh class C | 3 | – | |
| Hepatitis B virus infection | 13 | – | – |
| Alcoholic liver disease | 6 | – | – |
| Primary biliary cholangitis | 7 | – | – |
| Cryptogenic cirrhosis | 6 | – | – |
Fig. 1Normalization of original data, PCA and PLS-DA, importance in projection (VIP) analysis and cross validation of the optimal number of components of classification. a The appearance of characteristic graphical summary of data became bell-shaped distribution after a log transformation. b and c Both two dimension scores plot and three dimension scores plot of PCA indicated that there was a distinguished classification between the observation clustering of liver cirrhosis group and that of healthy control group. d and e Both two dimension scores plot and three dimension scores plot of PLS-DA indicated that there was a distinguished classification between the observation clustering of liver cirrhosis group and that of healthy control group. f and g VIP analysis of PLS-DA indicated that TCA was the most important metabolite in component one and component two. h Cross validation analysis indicated that two components model was the optimal model
Fig. 2Heatmap analysis, summary of pathway effect, compound impact on pathway and Spearman correlation. a Heatmap analysis indicated that TCA, TCDCA, TUDCA, GCA, UDCA, CDCA, CA, TLCA, TDCA, HDCA and LCA were increased in liver cirrhosis as compared with healthy controls. b Pathway analysis showed that primary bile acid biosynthesis was increased in liver cirrhosis. 1: bile acid biosynthesis. 2: taurine and hypotaurine metabolism. c Compound impact analysis implied that TCA impacted most in the increased primary bile acid biosynthesis in liver cirrhosis. d Spearman correlation analysis indicated that concentrations of TCA, GCA and TCDCA were significantly positively correlated with Child-Pugh classification (P < 0.0001). And concentrations of LCA, HDCA, CDCA, UDCA, CA, TLCA, TDCA and TUDCA were not correlated with Child-Pugh classification (P > 0.05)
Fold change of bile acid in liver cirrhosis
| TCA | TCDCA | TUDCA | GCA | UDCA | CDCA | CA | TLCA | TDCA | HDCA | LCA | DCA | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Fold Change(FC) | 76.343 | 47.358 | 32.897 | 27.335 | 12.131 | 6.1778 | 5.714 | 4.9992 | 4.7731 | 3.4723 | 2.3062 | 1.1365 |
| log2(FC) | 6.2544 | 5.5655 | 5.0399 | 4.7727 | 3.6006 | 2.6271 | 2.5145 | 2.3217 | 2.2549 | 1.7959 | 1.2055 | 0.18464 |
Comparison of concentration of twelve bile acids between liver cirrhosis and healthy control
| t |
| -log10( | FDR | |
|---|---|---|---|---|
| TCA | 10.11 | 2.51 × 10−14 | 13.6 | 2.16 × 10−13 |
| TCDCA | 10.013 | 3.59 × 10−14 | 13.445 | 2.16 × 10−13 |
| GCA | 9.7355 | 9.95 × 10−14 | 13.002 | 3.98 × 10−13 |
| TUDCA | 8.6658 | 5.45 × 10−12 | 11.264 | 1.63 × 10−11 |
| TDCA | 7.2181 | 1.38 × 10−9 | 8.8608 | 3.31 × 10−09 |
| HDCA | 4.69 | 1.75 × 10−5 | 4.757 | 3.50 × 10−05 |
| LCA | 4.2705 | 7.47 × 10−5 | 4.1266 | 0.00012808 |
| UDCA | 3.4311 | 0.001125 | 2.9489 | 0.0016874 |
| CDCA | 3.2898 | 0.0017223 | 2.7639 | 0.0022964 |
| TLCA | 3.2346 | 0.0020289 | 2.6927 | 0.0024346 |
| CA | 3.0365 | 0.0036053 | 2.4431 | 0.003933 |
| DCA | −2.3474 | 0.022403 | 1.6497 | 0.022403 |
FDR value is the false discovery rate adjusted P value
Pathway analysis of twelve bile acids in liver cirrhosis compared with healthy volunteers
| Pathway name | Hit |
| -log( | FDR | Impact |
|---|---|---|---|---|---|
| Primary bile acid biosynthesis | 5 | 5.72 × 10–10 | 21.281 | 1.05 × 10–9 | 0.10527 |
| Taurine and hypotaurine metabolism | 1 | 1.05 × 10–9 | 20.677 | 1.05 × 10–9 | 0 |
Hit means the matched number of bile acid in metabolization pathway; The P value is calculated from the enrichment analysis; Impact value is calculate from pathway topography analysis; FDR value is the false discovery rate adjusted P value
Fig. 3Cell experiment. a Cell proliferation assay indicated that growth rate of LX-2 cells treated with the different concentrations of Na+/taurocholate were increased compared to that of the control group. Moreover, the effect was dose-dependent. *P < 0.05 compared with control. b and c Western blot indicated that expression of Collagen Type I and α-SMA was increased by TCA treatment as compared with the control. Moreover, effect of TCA on the expression of Collagen Type I and α-SMA was also dose-dependent. TCA50 means 50 μM Na+/taurocholate, and TCA100 means 100 μM Na+/taurocholate. *P < 0.05 compared with control. d and e Western blot indicated that the effect of TCA on Collagen Type I and TLR4 expressions in co-culture groups was more significant than that in mono-culture group. TCA50 means 50 μM Na+/taurocholate, and TCA100 means 100 μM Na+/taurocholate. *P < 0.05 compared with mono-culture group