Literature DB >> 20214461

Genetic epidemiology of COPD (COPDGene) study design.

Elizabeth A Regan1, John E Hokanson, James R Murphy, Barry Make, David A Lynch, Terri H Beaty, Douglas Curran-Everett, Edwin K Silverman, James D Crapo.   

Abstract

BACKGROUND: COPDGene is a multicenter observational study designed to identify genetic factors associated with COPD. It will also characterize chest CT phenotypes in COPD subjects, including assessment of emphysema, gas trapping, and airway wall thickening. Finally, subtypes of COPD based on these phenotypes will be used in a comprehensive genome-wide study to identify COPD susceptibility genes. METHODS/
RESULTS: COPDGene will enroll 10,000 smokers with and without COPD across the GOLD stages. Both Non-Hispanic white and African-American subjects are included in the cohort. Inspiratory and expiratory chest CT scans will be obtained on all participants. In addition to the cross-sectional enrollment process, these subjects will be followed regularly for longitudinal studies. A genome-wide association study (GWAS) will be done on an initial group of 4000 subjects to identify genetic variants associated with case-control status and several quantitative phenotypes related to COPD. The initial findings will be verified in an additional 2000 COPD cases and 2000 smoking control subjects, and further validation association studies will be carried out.
CONCLUSIONS: COPDGene will provide important new information about genetic factors in COPD, and will characterize the disease process using high resolution CT scans. Understanding genetic factors and CT phenotypes that define COPD will potentially permit earlier diagnosis of this disease and may lead to the development of treatments to modify progression.

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Year:  2010        PMID: 20214461      PMCID: PMC2924193          DOI: 10.3109/15412550903499522

Source DB:  PubMed          Journal:  COPD        ISSN: 1541-2563            Impact factor:   2.409


  18 in total

1.  Heritability of longitudinal change in lung function. The Framingham study.

Authors:  D J Gottlieb; J B Wilk; M Harmon; J C Evans; O Joost; D Levy; G T O'Connor; R H Myers
Journal:  Am J Respir Crit Care Med       Date:  2001-11-01       Impact factor: 21.405

2.  Familial prevalence of chronic obstructive pulmonary disease in a matched pair study.

Authors:  F Kueppers; R D Miller; H Gordon; N G Hepper; K Offord
Journal:  Am J Med       Date:  1977-09       Impact factor: 4.965

3.  Risk factors in chronic obstructive pulmonary disease (COPD).

Authors:  B H Cohen; W C Ball; S Brashears; E L Diamond; P Kreiss; D A Levy; H A Menkes; S Permutt; M S Tockman
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4.  Deaths: final data for 1999.

Authors:  D L Hoyert; E Arias; B L Smith; S L Murphy; K D Kochanek
Journal:  Natl Vital Stat Rep       Date:  2001-09-21

5.  Siblings of patients with severe chronic obstructive pulmonary disease have a significant risk of airflow obstruction.

Authors:  S C McCloskey; B D Patel; S J Hinchliffe; E D Reid; N J Wareham; D A Lomas
Journal:  Am J Respir Crit Care Med       Date:  2001-10-15       Impact factor: 21.405

6.  Genetic epidemiology of severe, early-onset chronic obstructive pulmonary disease. Risk to relatives for airflow obstruction and chronic bronchitis.

Authors:  E K Silverman; H A Chapman; J M Drazen; S T Weiss; B Rosner; E J Campbell; W J O'DONNELL; J J Reilly; L Ginns; S Mentzer; J Wain; F E Speizer
Journal:  Am J Respir Crit Care Med       Date:  1998-06       Impact factor: 21.405

Review 7.  Exacerbations in chronic obstructive pulmonary disease: do they contribute to disease progression?

Authors:  Edwin K Silverman
Journal:  Proc Am Thorac Soc       Date:  2007-12

8.  Chronic obstructive pulmonary disease surveillance--United States, 1971-2000.

Authors:  David M Mannino; David M Homa; Lara J Akinbami; Earl S Ford; Stephen C Redd
Journal:  MMWR Surveill Summ       Date:  2002-08-02

9.  A genome-wide association study of pulmonary function measures in the Framingham Heart Study.

Authors:  Jemma B Wilk; Ting-Hsu Chen; Daniel J Gottlieb; Robert E Walter; Michael W Nagle; Brian J Brandler; Richard H Myers; Ingrid B Borecki; Edwin K Silverman; Scott T Weiss; George T O'Connor
Journal:  PLoS Genet       Date:  2009-03-20       Impact factor: 5.917

10.  A genome-wide association study in chronic obstructive pulmonary disease (COPD): identification of two major susceptibility loci.

Authors:  Sreekumar G Pillai; Dongliang Ge; Guohua Zhu; Xiangyang Kong; Kevin V Shianna; Anna C Need; Sheng Feng; Craig P Hersh; Per Bakke; Amund Gulsvik; Andreas Ruppert; Karin C Lødrup Carlsen; Allen Roses; Wayne Anderson; Stephen I Rennard; David A Lomas; Edwin K Silverman; David B Goldstein
Journal:  PLoS Genet       Date:  2009-03-20       Impact factor: 5.917

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  595 in total

1.  Relational Modeling for Robust and Efficient Pulmonary Lobe Segmentation in CT Scans.

Authors:  Weiyi Xie; Colin Jacobs; Jean-Paul Charbonnier; Bram van Ginneken
Journal:  IEEE Trans Med Imaging       Date:  2020-08       Impact factor: 10.048

2.  GOLD 2011 disease severity classification in COPDGene: a prospective cohort study.

Authors:  MeiLan K Han; Hana Muellerova; Douglas Curran-Everett; Mark T Dransfield; George R Washko; Elizabeth A Regan; Russell P Bowler; Terri H Beaty; John E Hokanson; David A Lynch; Paul W Jones; Antonio Anzueto; Fernando J Martinez; James D Crapo; Edwin K Silverman; Barry J Make
Journal:  Lancet Respir Med       Date:  2012-09-03       Impact factor: 30.700

3.  Pulmonary lobe segmentation based on ridge surface sampling and shape model fitting.

Authors:  James C Ross; Gordon L Kindlmann; Yuka Okajima; Hiroto Hatabu; Alejandro A Díaz; Edwin K Silverman; George R Washko; Jennifer Dy; Raúl San José Estépar
Journal:  Med Phys       Date:  2013-12       Impact factor: 4.071

4.  Generative-based airway and vessel morphology quantification on chest CT images.

Authors:  Pietro Nardelli; James C Ross; Raúl San José Estépar
Journal:  Med Image Anal       Date:  2020-03-28       Impact factor: 8.545

5.  The clinical impact of non-obstructive chronic bronchitis in current and former smokers.

Authors:  Carlos H Martinez; Victor Kim; Yahong Chen; Ella A Kazerooni; Susan Murray; Gerard J Criner; Jeffrey L Curtis; Elizabeth A Regan; Emily Wan; Craig P Hersh; Edwin K Silverman; James D Crapo; Fernando J Martinez; Meilan K Han
Journal:  Respir Med       Date:  2013-11-15       Impact factor: 3.415

6.  Computed tomographic measures of airway morphology in smokers and never-smoking normals.

Authors:  G R Washko; A A Diaz; V Kim; R G Barr; M T Dransfield; J Schroeder; J J Reilly; J W Ramsdell; A McKenzie; E J R Van Beek; D A Lynch; J P Butler; M K Han
Journal:  J Appl Physiol (1985)       Date:  2014-01-16

7.  Plasma sphingolipids associated with chronic obstructive pulmonary disease phenotypes.

Authors:  Russell P Bowler; Sean Jacobson; Charmion Cruickshank; Grant J Hughes; Charlotte Siska; Daniel S Ory; Irina Petrache; Jean E Schaffer; Nichole Reisdorph; Katerina Kechris
Journal:  Am J Respir Crit Care Med       Date:  2015-02-01       Impact factor: 21.405

8.  Pulmonary Lobe Segmentation With Probabilistic Segmentation of the Fissures and a Groupwise Fissure Prior.

Authors:  Felix J S Bragman; Jamie R McClelland; Joseph Jacob; John R Hurst; David J Hawkes
Journal:  IEEE Trans Med Imaging       Date:  2017-04-18       Impact factor: 10.048

9.  Abdominal Visceral Adipose Tissue is Associated with Myocardial Infarction in Patients with COPD.

Authors:  Alejandro A Diaz; Tom P Young; Sila Kurugol; Erick Eckbo; Nina Muralidhar; Joshua K Chapman; Gregory L Kinney; James C Ross; Raul San Jose Estepar; Rola Harmouche; Jennifer L Black-Shinn; Matthew Budoff; Russell P Bowler; John Hokanson; George R Washko
Journal:  Chronic Obstr Pulm Dis       Date:  2015

10.  Biomarkers Predictive of Exacerbations in the SPIROMICS and COPDGene Cohorts.

Authors:  Jason D Keene; Sean Jacobson; Katerina Kechris; Gregory L Kinney; Marilyn G Foreman; Claire M Doerschuk; Barry J Make; Jeffrey L Curtis; Stephen I Rennard; R Graham Barr; Eugene R Bleecker; Richard E Kanner; Eric C Kleerup; Nadia N Hansel; Prescott G Woodruff; MeiLan K Han; Robert Paine; Fernando J Martinez; Russell P Bowler; Wanda K O'Neal
Journal:  Am J Respir Crit Care Med       Date:  2017-02-15       Impact factor: 21.405

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