Literature DB >> 29994670

Keypoint Transfer for Fast Whole-Body Segmentation.

Christian Wachinger, Matthew Toews, Georg Langs, William Wells, Polina Golland.   

Abstract

We introduce an approach for image segmentation based on sparse correspondences between keypoints in testing and training images. Keypoints represent automatically identified distinctive image locations, where each keypoint correspondence suggests a transformation between images. We use these correspondences to transfer the label maps of entire organs from the training images to the test image. The keypoint transfer algorithm includes three steps: 1) keypoint matching; 2) voting-based keypoint labeling; and 3) keypoint-based probabilistic transfer of organ segmentations. We report segmentation results for abdominal organs in whole-body CT and MRI, as well as in contrast-enhanced CT and MRI. Our method offers a speed-up of about three orders of magnitude in comparison with common multi-atlas segmentation while achieving an accuracy that compares favorably. Moreover, keypoint transfer does not require the registration to an atlas or a training phase. Finally, the method allows for the segmentation of scans with a highly variable field-of-view.

Entities:  

Mesh:

Year:  2018        PMID: 29994670      PMCID: PMC6310119          DOI: 10.1109/TMI.2018.2851194

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  23 in total

1.  Patch-based segmentation using expert priors: application to hippocampus and ventricle segmentation.

Authors:  Pierrick Coupé; José V Manjón; Vladimir Fonov; Jens Pruessner; Montserrat Robles; D Louis Collins
Journal:  Neuroimage       Date:  2010-09-17       Impact factor: 6.556

2.  Label fusion in atlas-based segmentation using a selective and iterative method for performance level estimation (SIMPLE).

Authors:  Thomas Robin Langerak; Uulke A van der Heide; Alexis N T J Kotte; Max A Viergever; Marco van Vulpen; Josien P W Pluim
Journal:  IEEE Trans Med Imaging       Date:  2010-07-26       Impact factor: 10.048

3.  Entangled decision forests and their application for semantic segmentation of CT images.

Authors:  Albert Montillo; Jamie Shotton; John Winn; Juan Eugenio Iglesias; Dimitri Metaxas; Antonio Criminisi
Journal:  Inf Process Med Imaging       Date:  2011

4.  Combining generative and discriminative models for semantic segmentation of CT scans via active learning.

Authors:  Juan Eugenio Iglesias; Ender Konukoglu; Albert Montillo; Zhuowen Tu; Antonio Criminisi
Journal:  Inf Process Med Imaging       Date:  2011

5.  Contour-Driven Atlas-Based Segmentation.

Authors:  Christian Wachinger; Karl Fritscher; Greg Sharp; Polina Golland
Journal:  IEEE Trans Med Imaging       Date:  2015-06-09       Impact factor: 10.048

6.  Cloud-Based Evaluation of Anatomical Structure Segmentation and Landmark Detection Algorithms: VISCERAL Anatomy Benchmarks.

Authors:  Oscar Jimenez-Del-Toro; Henning Muller; Markus Krenn; Katharina Gruenberg; Abdel Aziz Taha; Marianne Winterstein; Ivan Eggel; Antonio Foncubierta-Rodriguez; Orcun Goksel; Andras Jakab; Georgios Kontokotsios; Georg Langs; Bjoern H Menze; Tomas Salas Fernandez; Roger Schaer; Anna Walleyo; Marc-Andre Weber; Yashin Dicente Cid; Tobias Gass; Mattias Heinrich; Fucang Jia; Fredrik Kahl; Razmig Kechichian; Dominic Mai; Assaf B Spanier; Graham Vincent; Chunliang Wang; Daniel Wyeth; Allan Hanbury
Journal:  IEEE Trans Med Imaging       Date:  2016-06-09       Impact factor: 10.048

7.  A generative model for image segmentation based on label fusion.

Authors:  Mert R Sabuncu; B T Thomas Yeo; Koen Van Leemput; Bruce Fischl; Polina Golland
Journal:  IEEE Trans Med Imaging       Date:  2010-06-17       Impact factor: 10.048

8.  A Feature-Based Approach to Big Data Analysis of Medical Images.

Authors:  Matthew Toews; Christian Wachinger; Raul San Jose Estepar; William M Wells
Journal:  Inf Process Med Imaging       Date:  2015

9.  Symmetric diffeomorphic image registration with cross-correlation: evaluating automated labeling of elderly and neurodegenerative brain.

Authors:  B B Avants; C L Epstein; M Grossman; J C Gee
Journal:  Med Image Anal       Date:  2007-06-23       Impact factor: 8.545

10.  Automatic anatomical brain MRI segmentation combining label propagation and decision fusion.

Authors:  Rolf A Heckemann; Joseph V Hajnal; Paul Aljabar; Daniel Rueckert; Alexander Hammers
Journal:  Neuroimage       Date:  2006-07-24       Impact factor: 6.556

View more
  1 in total

1.  Efficient Pairwise Neuroimage Analysis Using the Soft Jaccard Index and 3D Keypoint Sets.

Authors:  Laurent Chauvin; Kuldeep Kumar; Christian Desrosiers; William Wells; Matthew Toews
Journal:  IEEE Trans Med Imaging       Date:  2022-04-01       Impact factor: 11.037

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.