Literature DB >> 29993538

Unsupervised Reverse Domain Adaptation for Synthetic Medical Images via Adversarial Training.

Faisal Mahmood, Richard Chen, Nicholas J Durr.   

Abstract

To realize the full potential of deep learning for medical imaging, large annotated datasets are required for training. Such datasets are difficult to acquire due to privacy issues, lack of experts available for annotation, underrepresentation of rare conditions, and poor standardization. The lack of annotated data has been addressed in conventional vision applications using synthetic images refined via unsupervised adversarial training to look like real images. However, this approach is difficult to extend to general medical imaging because of the complex and diverse set of features found in real human tissues. We propose a novel framework that uses a reverse flow, where adversarial training is used to make real medical images more like synthetic images, and clinically-relevant features are preserved via self-regularization. These domain-adapted synthetic-like images can then be accurately interpreted by networks trained on large datasets of synthetic medical images. We implement this approach on the notoriously difficult task of depth-estimation from monocular endoscopy which has a variety of applications in colonoscopy, robotic surgery, and invasive endoscopic procedures. We train a depth estimator on a large data set of synthetic images generated using an accurate forward model of an endoscope and an anatomically-realistic colon. Our analysis demonstrates that the structural similarity of endoscopy depth estimation in a real pig colon predicted from a network trained solely on synthetic data improved by 78.7% by using reverse domain adaptation.

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Year:  2018        PMID: 29993538     DOI: 10.1109/TMI.2018.2842767

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  25 in total

1.  Augmenting Colonoscopy using Extended and Directional CycleGAN for Lossy Image Translation.

Authors:  Shawn Mathew; Saad Nadeem; Sruti Kumari; Arie Kaufman
Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit       Date:  2020-08-05

2.  Development of Algorithms for Automated Detection of Cervical Pre-Cancers With a Low-Cost, Point-of-Care, Pocket Colposcope.

Authors:  Mercy Nyamewaa Asiedu; Anish Simhal; Usamah Chaudhary; Jenna L Mueller; Christopher T Lam; John W Schmitt; Gino Venegas; Guillermo Sapiro; Nimmi Ramanujam
Journal:  IEEE Trans Biomed Eng       Date:  2018-12-18       Impact factor: 4.538

3.  Boundary-Weighted Domain Adaptive Neural Network for Prostate MR Image Segmentation.

Authors:  Qikui Zhu; Bo Du; Pingkun Yan
Journal:  IEEE Trans Med Imaging       Date:  2019-08-13       Impact factor: 10.048

4.  CycleGAN for style transfer in X-ray angiography.

Authors:  Oleksandra Tmenova; Rémi Martin; Luc Duong
Journal:  Int J Comput Assist Radiol Surg       Date:  2019-07-08       Impact factor: 2.924

5.  CAI4CAI: The Rise of Contextual Artificial Intelligence in Computer Assisted Interventions.

Authors:  Tom Vercauteren; Mathias Unberath; Nicolas Padoy; Nassir Navab
Journal:  Proc IEEE Inst Electr Electron Eng       Date:  2019-10-23       Impact factor: 10.961

Review 6.  Radiomics: from qualitative to quantitative imaging.

Authors:  William Rogers; Sithin Thulasi Seetha; Turkey A G Refaee; Relinde I Y Lieverse; Renée W Y Granzier; Abdalla Ibrahim; Simon A Keek; Sebastian Sanduleanu; Sergey P Primakov; Manon P L Beuque; Damiënne Marcus; Alexander M A van der Wiel; Fadila Zerka; Cary J G Oberije; Janita E van Timmeren; Henry C Woodruff; Philippe Lambin
Journal:  Br J Radiol       Date:  2020-02-26       Impact factor: 3.039

7.  Using synthetic data generation to train a cardiac motion tag tracking neural network.

Authors:  Michael Loecher; Luigi E Perotti; Daniel B Ennis
Journal:  Med Image Anal       Date:  2021-09-10       Impact factor: 8.545

8.  Joint estimation of depth and motion from a monocular endoscopy image sequence using a multi-loss rebalancing network.

Authors:  Shiyuan Liu; Jingfan Fan; Dengpan Song; Tianyu Fu; Yucong Lin; Deqiang Xiao; Hong Song; Yongtian Wang; Jian Yang
Journal:  Biomed Opt Express       Date:  2022-04-11       Impact factor: 3.562

9.  A Survey of Unsupervised Deep Domain Adaptation.

Authors:  Garrett Wilson; Diane J Cook
Journal:  ACM Trans Intell Syst Technol       Date:  2020-07-05       Impact factor: 4.654

10.  Stomach 3D Reconstruction Using Virtual Chromoendoscopic Images.

Authors:  Aji Resindra Widya; Yusuke Monno; Masatoshi Okutomi; Sho Suzuki; Takuji Gotoda; Kenji Miki
Journal:  IEEE J Transl Eng Health Med       Date:  2021-02-24       Impact factor: 3.316

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