Literature DB >> 29986717

Evaluation of loop-mediated isothermal amplification as a surveillance tool for malaria in reactive case detection moving towards elimination.

Munyaradzi Tambo1, Joyce R Auala1, Hugh J Sturrock2, Immo Kleinschmidt3, Ronnie Bock4, Jennifer L Smith2, Roland Gosling2, Davis R Mumbengegwi5.   

Abstract

BACKGROUND: As malaria transmission decreases, the proportion of infections that are asymptomatic at any given time increases. This poses a challenge for diagnosis as routinely used rapid diagnostic tests (RDTs) miss asymptomatic malaria cases with low parasite densities due to poor sensitivity. Yet, asymptomatic infections can contribute to onward transmission of malaria and therefore act as infectious reservoirs and perpetuate malaria transmission. This study compared the performance of RDTs to loop-mediated isothermal amplification (LAMP) in the diagnosis of malaria during reactive active case detection surveillance.
METHODS: All reported malaria cases in the Engela Health District of Namibia were traced back to their place of residence and persons living within the four closest neighbouring houses to the index case (neighbourhood) were tested for malaria infection with RDTs and dried blood spots (DBS) were collected. LAMP and nested PCR (nPCR) were carried out on all RDTs and DBS. The same procedure was followed in randomly selected control neighbourhoods.
RESULTS: Some 3151 individuals were tested by RDT, LAMP and nPCR. Sensitivity of RDTs and LAMP were 9.30 and 95.50%, respectively, and specificities were 99.27 and 99.92%, respectively, compared to nPCR. LAMP carried out on collected RDTs showed a sensitivity and specificity of 95.35 and 99.85% compared to nPCR carried out on DBS. There were 2 RDT samples that were negative by LAMP but the corresponding DBS samples were positive by PCR.
CONCLUSION: The study showed that LAMP had the equivalent performance as nPCR for the identification of Plasmodium falciparum infection. Given its relative simplicity to implement over more complex and time-consuming methods, such as PCR, LAMP is particularly useful in elimination settings where high sensitivity and ease of operation are important.

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Year:  2018        PMID: 29986717      PMCID: PMC6038281          DOI: 10.1186/s12936-018-2399-x

Source DB:  PubMed          Journal:  Malar J        ISSN: 1475-2875            Impact factor:   2.979


  25 in total

1.  Comparative diagnosis of malaria infections by microscopy, nested PCR, and LAMP in northern Thailand.

Authors:  Birgit Pöschl; Jarurin Waneesorn; Oriel Thekisoe; Salakchit Chutipongvivate; Panagiotis Karanis; Karanis Panagiotis
Journal:  Am J Trop Med Hyg       Date:  2010-07       Impact factor: 2.345

2.  A loop-mediated isothermal amplification (LAMP) assay for the rapid detection of Enterococcus spp. in water.

Authors:  Roland Martzy; Claudia Kolm; Kurt Brunner; Robert L Mach; Rudolf Krska; Hana Šinkovec; Regina Sommer; Andreas H Farnleitner; Georg H Reischer
Journal:  Water Res       Date:  2017-05-13       Impact factor: 11.236

3.  Stable and unstable malaria hotspots in longitudinal cohort studies in Kenya.

Authors:  Philip Bejon; Thomas N Williams; Anne Liljander; Abdisalan M Noor; Juliana Wambua; Edna Ogada; Ally Olotu; Faith H A Osier; Simon I Hay; Anna Färnert; Kevin Marsh
Journal:  PLoS Med       Date:  2010-07-06       Impact factor: 11.069

4.  Rapid diagnostic tests for malaria at sites of varying transmission intensity in Uganda.

Authors:  Heidi Hopkins; Lisa Bebell; Wilson Kambale; Christian Dokomajilar; Philip J Rosenthal; Grant Dorsey
Journal:  J Infect Dis       Date:  2008-02-15       Impact factor: 5.226

Review 5.  Operational strategies to achieve and maintain malaria elimination.

Authors:  Bruno Moonen; Justin M Cohen; Robert W Snow; Laurence Slutsker; Chris Drakeley; David L Smith; Rabindra R Abeyasinghe; Mario Henry Rodriguez; Rajendra Maharaj; Marcel Tanner; Geoffrey Targett
Journal:  Lancet       Date:  2010-10-28       Impact factor: 79.321

6.  Accuracy of malaria rapid diagnostic tests in community studies and their impact on treatment of malaria in an area with declining malaria burden in north-eastern Tanzania.

Authors:  Deus S Ishengoma; Filbert Francis; Bruno P Mmbando; John P A Lusingu; Pamela Magistrado; Michael Alifrangis; Thor G Theander; Ib C Bygbjerg; Martha M Lemnge
Journal:  Malar J       Date:  2011-06-26       Impact factor: 2.979

7.  Evaluation of non-instrumented nucleic acid amplification by loop-mediated isothermal amplification (NINA-LAMP) for the diagnosis of malaria in Northwest Ethiopia.

Authors:  Meslo Sema; Abebe Alemu; Abebe Genetu Bayih; Sisay Getie; Gebeyaw Getnet; Dylan Guelig; Robert Burton; Paul LaBarre; Dylan R Pillai
Journal:  Malar J       Date:  2015-01-28       Impact factor: 2.979

8.  Spatial clustering of patent and sub-patent malaria infections in northern Namibia: Implications for surveillance and response strategies for elimination.

Authors:  Jennifer L Smith; Joyce Auala; Munyaradzi Tambo; Erastus Haindongo; Stark Katokele; Petrina Uusiku; Roly Gosling; Immo Kleinschmidt; Davis Mumbengegwi; Hugh J W Sturrock
Journal:  PLoS One       Date:  2017-08-18       Impact factor: 3.240

9.  Rapid diagnostic tests for molecular surveillance of Plasmodium falciparum malaria -assessment of DNA extraction methods and field applicability.

Authors:  Ulrika Morris; Berit Aydin-Schmidt; Delér Shakely; Andreas Mårtensson; Louise Jörnhagen; Abdullah S Ali; Mwinyi I Msellem; Max Petzold; José P Gil; Pedro E Ferreira; Anders Björkman
Journal:  Malar J       Date:  2013-03-19       Impact factor: 2.979

10.  MALARIA DIAGNOSIS BY LOOP-MEDIATED ISOTHERMAL AMPLIFICATION (LAMP) IN THAILAND.

Authors:  Ronja Ocker; Yongyut Prompunjai; Salakchit Chutipongvivate; Panagiotis Karanis
Journal:  Rev Inst Med Trop Sao Paulo       Date:  2016-04-08       Impact factor: 1.846

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  8 in total

Review 1.  A Systematic Review and Meta-Analysis of Malaria Test Positivity Outcomes and Programme Interventions in Low Transmission Settings in Southern Africa, 2000-2021.

Authors:  Olukunle O Oyegoke; Olusegun P Akoniyon; Ropo E Ogunsakin; Michael O Ogunlana; Matthew A Adeleke; Rajendra Maharaj; Moses Okpeku
Journal:  Int J Environ Res Public Health       Date:  2022-06-01       Impact factor: 4.614

2.  Spatial clustering of patent and sub-patent malaria infections in northern Namibia: Implications for surveillance and response strategies for elimination.

Authors:  Jennifer L Smith; Joyce Auala; Munyaradzi Tambo; Erastus Haindongo; Stark Katokele; Petrina Uusiku; Roly Gosling; Immo Kleinschmidt; Davis Mumbengegwi; Hugh J W Sturrock
Journal:  PLoS One       Date:  2017-08-18       Impact factor: 3.240

3.  Loop-mediated isothermal amplification (LAMP) and Polymerase Chain Reaction (PCR) as quality assurance tools for Rapid Diagnostic Test (RDT) malaria diagnosis in Northern Namibia.

Authors:  Munyaradzi Tambo; Mary Mwinga; Davis R Mumbengegwi
Journal:  PLoS One       Date:  2018-12-12       Impact factor: 3.240

4.  Poor Diagnostic Performance of a Species-Specific Loop-Mediated Isothermal Amplification (LAMP) Platform for Malaria.

Authors:  Hans Kollenda; Ralf Matthias Hagen; Miriam Hanke; Sandra Rojak; Rebecca Hinz; Lars Wassill; Sven Poppert; Egbert Tannich; Hagen Frickmann
Journal:  Eur J Microbiol Immunol (Bp)       Date:  2018-09-28

Review 5.  Reactive Case Detection (RACD) and foci investigation strategies in malaria control and elimination: a review.

Authors:  Ruwanthi Perera; Amandhi Caldera; A Rajitha Wickremasinghe
Journal:  Malar J       Date:  2020-11-10       Impact factor: 2.979

Review 6.  Current methods for the detection of Plasmodium parasite species infecting humans.

Authors:  Lucinda Slater; Shoaib Ashraf; Osama Zahid; Qasim Ali; Muhammad Oneeb; Muhammad Haroon Akbar; Muhammad Ilyas Riaz; Kiran Afshan; Neil Sargison; Umer Chaudhry
Journal:  Curr Res Parasitol Vector Borne Dis       Date:  2022-03-19

7.  Use of real-time multiplex PCR, malaria rapid diagnostic test and microscopy to investigate the prevalence of Plasmodium species among febrile hospital patients in Sierra Leone.

Authors:  Tomasz A Leski; Chris Rowe Taitt; Abdulai G Swaray; Umaru Bangura; Nathanael D Reynolds; Andrew Holtz; Chadwick Yasuda; Joseph Lahai; Joseph M Lamin; Victoria Baio; Kathryn H Jacobsen; Rashid Ansumana; David A Stenger
Journal:  Malar J       Date:  2020-02-21       Impact factor: 2.979

8.  Quantifying Plasmodium falciparum infections clustering within households to inform household-based intervention strategies for malaria control programs: An observational study and meta-analysis from 41 malaria-endemic countries.

Authors:  Gillian Stresman; Charlie Whittaker; Hannah C Slater; Teun Bousema; Jackie Cook
Journal:  PLoS Med       Date:  2020-10-29       Impact factor: 11.069

  8 in total

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