Literature DB >> 29979189

Xi-cam: a versatile interface for data visualization and analysis.

Ronald J Pandolfi1, Daniel B Allan2, Elke Arenholz1, Luis Barroso-Luque1, Stuart I Campbell2, Thomas A Caswell2, Austin Blair1, Francesco De Carlo3, Sean Fackler1, Amanda P Fournier4, Guillaume Freychet1, Masafumi Fukuto2, Dogˇa Gürsoy3, Zhang Jiang3, Harinarayan Krishnan1, Dinesh Kumar1, R Joseph Kline5, Ruipeng Li2, Christopher Liman5, Stefano Marchesini1, Apurva Mehta4, Alpha T N'Diaye1, Dilworth Y Parkinson1, Holden Parks1, Lenson A Pellouchoud1, Talita Perciano1, Fang Ren4, Shreya Sahoo1, Joseph Strzalka3, Daniel Sunday5, Christopher J Tassone1, Daniela Ushizima1, Singanallur Venkatakrishnan6, Kevin G Yager7, Peter Zwart1, James A Sethian1, Alexander Hexemer1.   

Abstract

Xi-cam is an extensible platform for data management, analysis and visualization. Xi-cam aims to provide a flexible and extensible approach to synchrotron data treatment as a solution to rising demands for high-volume/high-throughput processing pipelines. The core of Xi-cam is an extensible plugin-based graphical user interface platform which provides users with an interactive interface to processing algorithms. Plugins are available for SAXS/WAXS/GISAXS/GIWAXS, tomography and NEXAFS data. With Xi-cam's `advanced' mode, data processing steps are designed as a graph-based workflow, which can be executed live, locally or remotely. Remote execution utilizes high-performance computing or de-localized resources, allowing for the effective reduction of high-throughput data. Xi-cam's plugin-based architecture targets cross-facility and cross-technique collaborative development, in support of multi-modal analysis. Xi-cam is open-source and cross-platform, and available for download on GitHub.

Keywords:  GISAXS; GIWAXS; NEXAFS; SAXS; WAXS; XAS; scattering; software; spectroscopy; tomography

Year:  2018        PMID: 29979189      PMCID: PMC6691515          DOI: 10.1107/S1600577518005787

Source DB:  PubMed          Journal:  J Synchrotron Radiat        ISSN: 0909-0495            Impact factor:   2.616


  5 in total

1.  Spicules and skeletons: mantle musculature of two species of dorid nudibranchs (Gastropoda: Nudibranchia: Doridina).

Authors:  B K Penney; J D Sigwart; D Y Parkinson
Journal:  Can J Zool       Date:  2020-10-29       Impact factor: 1.597

2.  SAXSDOG: open software for real-time azimuthal integration of 2D scattering images.

Authors:  Max Burian; Christian Meisenbichler; Denys Naumenko; Heinz Amenitsch
Journal:  J Appl Crystallogr       Date:  2022-05-28       Impact factor: 4.868

3.  Real-time reconstruction and visualisation towards dynamic feedback control during time-resolved tomography experiments at TOMCAT.

Authors:  Jan-Willem Buurlage; Federica Marone; Daniël M Pelt; Willem Jan Palenstijn; Marco Stampanoni; K Joost Batenburg; Christian M Schlepütz
Journal:  Sci Rep       Date:  2019-12-05       Impact factor: 4.379

4.  Preferred crystallographic orientation of cellulose in plant primary cell walls.

Authors:  Dan Ye; Sintu Rongpipi; Sarah N Kiemle; William J Barnes; Arielle M Chaves; Chenhui Zhu; Victoria A Norman; Alexander Liebman-Peláez; Alexander Hexemer; Michael F Toney; Alison W Roberts; Charles T Anderson; Daniel J Cosgrove; Esther W Gomez; Enrique D Gomez
Journal:  Nat Commun       Date:  2020-09-18       Impact factor: 14.919

5.  Microstructural differences between naturally-deposited and laboratory beach sands.

Authors:  Amy Ferrick; Vanshan Wright; Michael Manga; Nicholas Sitar
Journal:  Granul Matter       Date:  2021-11-11       Impact factor: 3.010

  5 in total

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