Literature DB >> 29978484

A novel mutation +5904 C>T of RUNX1 site in the erythroid cell-specific regulatory element decreases the ABO antigen expression in Chinese population.

Y Ying1,2, X Hong1,2, X Xu1,2, K Ma1,2, J He1,2, F Zhu1,2.   

Abstract

BACKGROUND: An erythroid cell-specific regulatory element (+5·8-kb) in the first intron of ABO is responsible for the antigen differential expression and the regulatory activity of the element was affected by the nucleotide mutation in the +5·8-kb region. Currently, many individuals with ABO subgroups were found in the Chinese population, but there was little information about the function of +5·8-kb region in these individuals. Here, we studied the mechanism of the mutation in the +5·8-kb region responsible for reducing of antigen expression in 30 ABO subtype Chinese individuals without mutation in the coding region or splicing site.
MATERIALS AND METHODS: The nucleotide sequence of the partial intron 1 covering the +5·8-kb site was amplified and directly sequenced. The haplotype with the novel mutation was obtained by the TOPO TA cloning. Both of the ABO promoter and the +5·8 kb regulatory element were subcloned into the basic luciferase reporter plasmid using the double endonuclease digestion. The promoter activity was examined by the dual-luciferase report vector with K562 cells.
RESULTS: A novel nucleotide substitution +5904 C>T located at RUNX1-binding site in the +5·8 kb site was identified from three individuals with B subtypes. +5890 T>G were found in three Bel and one Ael phenotypes. Cotransfection and luciferase assays demonstrated that the +5904 C>T could obviously reduce activity of the +5·8 kb site.
CONCLUSION: The study suggested that the transcriptional activity of the +5·8 kb site could be downregulated by the single point mutation of RUNX1 motif, leading to reduction in A or B antigen expression.
© 2018 International Society of Blood Transfusion.

Entities:  

Keywords:  ABO subtypes; RUNX1; novel nucleotide substitution; transcription

Year:  2018        PMID: 29978484     DOI: 10.1111/vox.12676

Source DB:  PubMed          Journal:  Vox Sang        ISSN: 0042-9007            Impact factor:   2.144


  4 in total

1.  Application of Blood Group Genotyping by Next-Generation Sequencing in Various Immunohaematology Cases.

Authors:  Tae Yeul Kim; HongBi Yu; Minh-Trang Thi Phan; Ja-Hyun Jang; Duck Cho
Journal:  Transfus Med Hemother       Date:  2021-08-11       Impact factor: 4.040

2.  Molecular Basis of ABO Variants Including Identification of 16 Novel ABO Subgroup Alleles in Chinese Han Population.

Authors:  Yan-Ling Ying; Xiao-Zhen Hong; Xian-Guo Xu; Shu Chen; Ji He; Fa-Ming Zhu; Xin-You Xie
Journal:  Transfus Med Hemother       Date:  2019-09-04       Impact factor: 3.747

Review 3.  A historical overview of advances in molecular genetic/genomic studies of the ABO blood group system.

Authors:  Fumiichiro Yamamoto
Journal:  Glycoconj J       Date:  2021-11-10       Impact factor: 3.009

4.  Analysis of the Genomic Sequence of ABO Allele Using Next-Generation Sequencing Method.

Authors:  Yanmin He; Xiaozhen Hong; Jingjing Zhang; Ji He; Faming Zhu; He Huang
Journal:  Front Immunol       Date:  2022-07-06       Impact factor: 8.786

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.