Literature DB >> 29972618

A multivariate lesion symptom mapping toolbox and examination of lesion-volume biases and correction methods in lesion-symptom mapping.

Andrew T DeMarco1, Peter E Turkeltaub1,2.   

Abstract

Lesion-symptom mapping has become a cornerstone of neuroscience research seeking to localize cognitive function in the brain by examining the sequelae of brain lesions. Recently, multivariate lesion-symptom mapping methods have emerged, such as support vector regression, which simultaneously consider many voxels at once when determining whether damaged regions contribute to behavioral deficits (Zhang, Kimberg, Coslett, Schwartz, & Wang, ). Such multivariate approaches are capable of identifying complex dependences that traditional mass-univariate approach cannot. Here, we provide a new toolbox for support vector regression lesion-symptom mapping (SVR-LSM) that provides a graphical interface and enhances the flexibility and rigor of analyses that can be conducted using this method. Specifically, the toolbox provides cluster-level family-wise error correction via permutation testing, the capacity to incorporate arbitrary nuisance models for behavioral data and lesion data and makes available a range of lesion volume correction methods including a new approach that regresses lesion volume out of each voxel in the lesion maps. We demonstrate these new tools in a cohort of chronic left-hemisphere stroke survivors and examine the difference between results achieved with various lesion volume control methods. A strong bias was found toward brain wide lesion-deficit associations in both SVR-LSM and traditional mass-univariate voxel-based lesion symptom mapping when lesion volume was not adequately controlled. This bias was corrected using three different regression approaches; among these, regressing lesion volume out of both the behavioral score and the lesion maps provided the greatest sensitivity in analyses.
© 2018 Wiley Periodicals, Inc.

Entities:  

Keywords:  Aphasia; lesion volume; lesion-symptom mapping; support vector regression

Mesh:

Year:  2018        PMID: 29972618      PMCID: PMC6647024          DOI: 10.1002/hbm.24289

Source DB:  PubMed          Journal:  Hum Brain Mapp        ISSN: 1065-9471            Impact factor:   5.038


  41 in total

1.  Right hemisphere grey matter structure and language outcomes in chronic left hemisphere stroke.

Authors:  Shihui Xing; Elizabeth H Lacey; Laura M Skipper-Kallal; Xiong Jiang; Michelle L Harris-Love; Jinsheng Zeng; Peter E Turkeltaub
Journal:  Brain       Date:  2015-10-31       Impact factor: 13.501

2.  Automated segmentation of chronic stroke lesions using LINDA: Lesion identification with neighborhood data analysis.

Authors:  Dorian Pustina; H Branch Coslett; Peter E Turkeltaub; Nicholas Tustison; Myrna F Schwartz; Brian Avants
Journal:  Hum Brain Mapp       Date:  2016-01-12       Impact factor: 5.038

3.  Power in Voxel-based lesion-symptom mapping.

Authors:  Daniel Y Kimberg; H Branch Coslett; Myrna F Schwartz
Journal:  J Cogn Neurosci       Date:  2007-07       Impact factor: 3.225

4.  Broca's area aphasias: aphasia after lesions including the frontal operculum.

Authors:  M P Alexander; M A Naeser; C Palumbo
Journal:  Neurology       Date:  1990-02       Impact factor: 9.910

5.  Corrections for multiple comparisons in voxel-based lesion-symptom mapping.

Authors:  Daniel Mirman; Jon-Frederick Landrigan; Spiro Kokolis; Sean Verillo; Casey Ferrara; Dorian Pustina
Journal:  Neuropsychologia       Date:  2017-08-26       Impact factor: 3.139

6.  Multivariate lesion-symptom mapping using support vector regression.

Authors:  Yongsheng Zhang; Daniel Y Kimberg; H Branch Coslett; Myrna F Schwartz; Ze Wang
Journal:  Hum Brain Mapp       Date:  2014-07-16       Impact factor: 5.038

7.  Anatomoclinical correlations of the aphasias as defined through computerized tomography: exceptions.

Authors:  A Basso; A R Lecours; S Moraschini; M Vanier
Journal:  Brain Lang       Date:  1985-11       Impact factor: 2.381

8.  Cerebral localization of impaired phonological retrieval during rhyme judgment.

Authors:  Sara B Pillay; Benjamin C Stengel; Colin Humphries; Diane S Book; Jeffrey R Binder
Journal:  Ann Neurol       Date:  2014-09-19       Impact factor: 10.422

9.  Lesion localization in aphasia with cranial computed tomography and the Boston Diagnostic Aphasia Exam.

Authors:  M A Naeser; R W Hayward
Journal:  Neurology       Date:  1978-06       Impact factor: 9.910

10.  Neural organization of spoken language revealed by lesion-symptom mapping.

Authors:  Daniel Mirman; Qi Chen; Yongsheng Zhang; Ze Wang; Olufunsho K Faseyitan; H Branch Coslett; Myrna F Schwartz
Journal:  Nat Commun       Date:  2015-04-16       Impact factor: 14.919

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  39 in total

1.  Movement Imitation via an Abstract Trajectory Representation in Dorsal Premotor Cortex.

Authors:  Aaron L Wong; Steven A Jax; Louisa L Smith; Laurel J Buxbaum; John W Krakauer
Journal:  J Neurosci       Date:  2019-02-25       Impact factor: 6.167

2.  An empirical evaluation of multivariate lesion behaviour mapping using support vector regression.

Authors:  Christoph Sperber; Daniel Wiesen; Hans-Otto Karnath
Journal:  Hum Brain Mapp       Date:  2018-12-13       Impact factor: 5.038

3.  Using machine learning-based lesion behavior mapping to identify anatomical networks of cognitive dysfunction: Spatial neglect and attention.

Authors:  Daniel Wiesen; Christoph Sperber; Grigori Yourganov; Christopher Rorden; Hans-Otto Karnath
Journal:  Neuroimage       Date:  2019-07-09       Impact factor: 6.556

4.  Functional anomaly mapping reveals local and distant dysfunction caused by brain lesions.

Authors:  Andrew T DeMarco; Peter E Turkeltaub
Journal:  Neuroimage       Date:  2020-04-10       Impact factor: 6.556

5.  Effects of age and left hemisphere lesions on audiovisual integration of speech.

Authors:  Kelly Michaelis; Laura C Erickson; Mackenzie E Fama; Laura M Skipper-Kallal; Shihui Xing; Elizabeth H Lacey; Zainab Anbari; Gina Norato; Josef P Rauschecker; Peter E Turkeltaub
Journal:  Brain Lang       Date:  2020-05-21       Impact factor: 2.381

6.  Dissociable Mechanisms of Verbal Working Memory Revealed through Multivariate Lesion Mapping.

Authors:  Maryam Ghaleh; Elizabeth H Lacey; Mackenzie E Fama; Zainab Anbari; Andrew T DeMarco; Peter E Turkeltaub
Journal:  Cereb Cortex       Date:  2020-04-14       Impact factor: 5.357

7.  Reduced competition between tool action neighbors in left hemisphere stroke.

Authors:  Frank E Garcea; Harrison Stoll; Laurel J Buxbaum
Journal:  Cortex       Date:  2019-06-19       Impact factor: 4.027

8.  A multivariate lesion symptom mapping toolbox and examination of lesion-volume biases and correction methods in lesion-symptom mapping.

Authors:  Andrew T DeMarco; Peter E Turkeltaub
Journal:  Hum Brain Mapp       Date:  2018-07-04       Impact factor: 5.038

9.  The role of conflict, feedback, and action comprehension in monitoring of action errors: Evidence for internal and external routes.

Authors:  Cortney M Howard; Louisa L Smith; H Branch Coslett; Laurel J Buxbaum
Journal:  Cortex       Date:  2019-02-14       Impact factor: 4.027

Review 10.  Multivariate Approaches to Understanding Aphasia and its Neural Substrates.

Authors:  Stephen M Wilson; William D Hula
Journal:  Curr Neurol Neurosci Rep       Date:  2019-06-27       Impact factor: 5.081

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