Literature DB >> 29963002

MicroRNA Signature of Traumatic Brain Injury: From the Biomarker Discovery to the Point-of-Care.

Valentina Di Pietro1,2,3, Kamal M Yakoub2, Ugo Scarpa2, Cinzia Di Pietro4, Antonio Belli1,2.   

Abstract

Traumatic brain injury (TBI) is a serious problem that causes high morbidity and mortality around the world. Currently, no reliable biomarkers are used to assess the severity and predict the recovery. Many protein biomarkers were extensively studied for diagnosis and prognosis of different TBI severities such as S-100β, glial fibrillary acidic protein (GFAP), neuron-specific enolase (NSE), neurofilament light chain (NFL), cleaved tau protein (C-tau), and ubiquitin C-terminal hydrolase-L1 (UCH-L1). However, none of these candidates is currently used in the clinical practice, due to relatively low sensitivity, for the diagnosis of mild TBI (mTBI) or mild to moderate TBI (MMTBI) patients who are clinically well and do not have a detectable intracranial pathology on the scans. MicroRNAs (miRNAs or miRs) are a class of small endogenous molecular regulators, which showed to be altered in different pathologies, including TBI and for this reason, their potential role in diagnosis, prognosis and therapeutic applications, is explored. Promising miRNAs such as miR-21, miR-16 or let-7i were identified as suitable candidate biomarkers for TBI and can differentiate mild from severe TBI. Also, they might represent new potential therapeutic targets. Identification of miRNA signature in tissue or biofluids, for several pathological conditions, is now possible thanks to the introduction of new high-throughput technologies such as microarray platform, Nanostring technologies or Next Generation Sequencing. This review has the aim to describe the role of microRNA in TBI and to explore the most commonly used techniques to identify microRNA profile. Understanding the strengths and limitations of the different methods can aid in the practical use of miRNA profiling for diverse clinical applications, including the development of a point-of-care device.

Entities:  

Keywords:  biomarkers; diagnosis; high-throughput technology; microRNA; point-of-care; prognosis; therapy; traumatic brain injury

Year:  2018        PMID: 29963002      PMCID: PMC6010584          DOI: 10.3389/fneur.2018.00429

Source DB:  PubMed          Journal:  Front Neurol        ISSN: 1664-2295            Impact factor:   4.003


  146 in total

1.  Rapid electronic detection of probe-specific microRNAs using thin nanopore sensors.

Authors:  Meni Wanunu; Tali Dadosh; Vishva Ray; Jingmin Jin; Larry McReynolds; Marija Drndić
Journal:  Nat Nanotechnol       Date:  2010-10-24       Impact factor: 39.213

2.  Direct multiplexed measurement of gene expression with color-coded probe pairs.

Authors:  Gary K Geiss; Roger E Bumgarner; Brian Birditt; Timothy Dahl; Naeem Dowidar; Dwayne L Dunaway; H Perry Fell; Sean Ferree; Renee D George; Tammy Grogan; Jeffrey J James; Malini Maysuria; Jeffrey D Mitton; Paola Oliveri; Jennifer L Osborn; Tao Peng; Amber L Ratcliffe; Philippa J Webster; Eric H Davidson; Leroy Hood; Krassen Dimitrov
Journal:  Nat Biotechnol       Date:  2008-02-17       Impact factor: 54.908

3.  mRNA and microRNA quality control for RT-qPCR analysis.

Authors:  C Becker; A Hammerle-Fickinger; I Riedmaier; M W Pfaffl
Journal:  Methods       Date:  2010-01-15       Impact factor: 3.608

4.  Methods for isolation of total RNA to recover miRNAs and other small RNAs from diverse species.

Authors:  Monica Accerbi; Skye A Schmidt; Emanuele De Paoli; Sunhee Park; Dong-Hoon Jeong; Pamela J Green
Journal:  Methods Mol Biol       Date:  2010

5.  RNA quantitation by fluorescence-based solution assay: RiboGreen reagent characterization.

Authors:  L J Jones; S T Yue; C Y Cheung; V L Singer
Journal:  Anal Biochem       Date:  1998-12-15       Impact factor: 3.365

6.  Differential response of miRNA-21 and its targets after traumatic brain injury in aging mice.

Authors:  Rajat Sandhir; Eugene Gregory; Nancy E J Berman
Journal:  Neurochem Int       Date:  2014-09-30       Impact factor: 3.921

7.  Analysis of circulating microRNA biomarkers in plasma and serum using quantitative reverse transcription-PCR (qRT-PCR).

Authors:  Evan M Kroh; Rachael K Parkin; Patrick S Mitchell; Muneesh Tewari
Journal:  Methods       Date:  2010-02-08       Impact factor: 3.608

8.  Conditional NF-L transgene expression in mice for in vivo analysis of turnover and transport rate of neurofilaments.

Authors:  Stéphanie Millecamps; Geneviève Gowing; Olga Corti; Jacques Mallet; Jean-Pierre Julien
Journal:  J Neurosci       Date:  2007-05-02       Impact factor: 6.167

9.  Transcriptomics of traumatic brain injury: gene expression and molecular pathways of different grades of insult in a rat organotypic hippocampal culture model.

Authors:  Valentina Di Pietro; Daven Amin; Salvatore Pernagallo; Giuseppe Lazzarino; Barbara Tavazzi; Roberto Vagnozzi; Ashley Pringle; Antonio Belli
Journal:  J Neurotrauma       Date:  2010-02       Impact factor: 5.269

Review 10.  S100B in neuropathologic states: the CRP of the brain?

Authors:  Jon Sen; Antonio Belli
Journal:  J Neurosci Res       Date:  2007-05-15       Impact factor: 4.164

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  21 in total

1.  Integrated Bioinformatics Analysis for the Identification of Key Molecules and Pathways in the Hippocampus of Rats After Traumatic Brain Injury.

Authors:  Xiao Xiao; Peng Bai; Shuqiang Cao; Youjing Jiang; Weibo Liang; Tao Wang; Xiaolei Luo; Qiaozhi Guan; Linbo Gao; Lin Zhang
Journal:  Neurochem Res       Date:  2020-01-30       Impact factor: 3.996

Review 2.  MicroRNAs and Regeneration in Animal Models of CNS Disorders.

Authors:  Tamara Roitbak
Journal:  Neurochem Res       Date:  2019-03-15       Impact factor: 3.996

Review 3.  Traumatic MicroRNAs: Deconvolving the Signal After Severe Traumatic Brain Injury.

Authors:  Martin Cente; Katarina Matyasova; Nikoleta Csicsatkova; Adela Tomikova; Sara Porubska; Yun Niu; Marek Majdan; Peter Filipcik; Igor Jurisica
Journal:  Cell Mol Neurobiol       Date:  2022-07-19       Impact factor: 4.231

4.  Propofol maintains Th17/Treg cell balance and reduces inflammation in rats with traumatic brain injury via the miR‑145‑3p/NFATc2/NF‑κB axis.

Authors:  Can Cui; Dengwen Zhang; Ke Sun; Haifeng Li; Liqian Xu; Gen Lin; Yuanbo Guo; Jiaqi Hu; Jieyuan Chen; Lidan Nong; Yujin Cai; Dongnan Yu; Wei Yang; Peng Wang; Yi Sun
Journal:  Int J Mol Med       Date:  2021-05-26       Impact factor: 4.101

5.  MicroRNAs: The New Challenge for Traumatic Brain Injury Diagnosis.

Authors:  Enrica Pinchi; Paola Frati; Mauro Arcangeli; Gianpietro Volonnino; Raoul Tomassi; Paola Santoro; Luigi Cipolloni
Journal:  Curr Neuropharmacol       Date:  2020       Impact factor: 7.363

6.  Study of Concussion in Rugby Union through MicroRNAs (SCRUM): a study protocol of a prospective, observational cohort study.

Authors:  Kamal M Yakoub; Patrick O'Halloran; David J Davies; Conor Bentley; Callum N Watson; Mario Forcione; Ugo Scarpa; Jonathan R B Bishop; Emma Toman; Douglas Hammond; Matthew J Cross; Keith A Stokes; Simon P T Kemp; David K Menon; Valentina Di Pietro; Antonio Belli
Journal:  BMJ Open       Date:  2018-11-25       Impact factor: 2.692

7.  Salivary MicroRNAs: Diagnostic Markers of Mild Traumatic Brain Injury in Contact-Sport.

Authors:  Valentina Di Pietro; Edoardo Porto; Marco Ragusa; Cristina Barbagallo; David Davies; Mario Forcione; Ann Logan; Cinzia Di Pietro; Michele Purrello; Michael Grey; Douglas Hammond; Vijay Sawlani; Aron K Barbey; Antonio Belli
Journal:  Front Mol Neurosci       Date:  2018-08-20       Impact factor: 5.639

8.  Real-Time Noninvasive Bioluminescence, Ultrasound and Photoacoustic Imaging in NFκB-RE-Luc Transgenic Mice Reveal Glia Maturation Factor-Mediated Immediate and Sustained Spatio-Temporal Activation of NFκB Signaling Post-Traumatic Brain Injury in a Gender-Specific Manner.

Authors:  Sudhanshu P Raikwar; Ramasamy Thangavel; Mohammad Ejaz Ahmed; Govindhasamy Pushpavathi Selvakumar; Duraisamy Kempuraj; Kristopher Wu; Osaid Khan; Kieran Bazley; Bret Bussinger; Klaudia Kukulka; Smita Zaheer; Shankar S Iyer; Raghav Govindarajan; Casey Burton; Donald James; Asgar Zaheer
Journal:  Cell Mol Neurobiol       Date:  2020-08-12       Impact factor: 5.046

9.  DNA methylation under the major depression pathway predicts pediatric quality of life four-month post-pediatric mild traumatic brain injury.

Authors:  Kuaikuai Duan; Andrew R Mayer; Nicholas A Shaff; Jiayu Chen; Dongdong Lin; Vince D Calhoun; Dawn M Jensen; Jingyu Liu
Journal:  Clin Epigenetics       Date:  2021-07-12       Impact factor: 6.551

10.  Chronic Regulation of miR-124-3p in the Perilesional Cortex after Experimental and Human TBI.

Authors:  Niina Vuokila; Eleonora Aronica; Anatoly Korotkov; Erwin Alexander van Vliet; Salma Nuzhat; Noora Puhakka; Asla Pitkänen
Journal:  Int J Mol Sci       Date:  2020-03-31       Impact factor: 5.923

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