Literature DB >> 29959472

Identification and characterization of Rht25, a locus on chromosome arm 6AS affecting wheat plant height, heading time, and spike development.

Youngjun Mo1,2, Leonardo S Vanzetti3,4, Iago Hale5, Emiliano J Spagnolo3, Fabio Guidobaldi4, Jassim Al-Oboudi1, Natalie Odle1, Stephen Pearce6, Marcelo Helguera3, Jorge Dubcovsky7,8.   

Abstract

KEY MESSAGE: This study identified Rht25, a new plant height locus on wheat chromosome arm 6AS, and characterized its pleiotropic effects on important agronomic traits. Understanding genes regulating wheat plant height is important to optimize harvest index and maximize grain yield. In modern wheat varieties grown under high-input conditions, the gibberellin-insensitive semi-dwarfing alleles Rht-B1b and Rht-D1b have been used extensively to confer lodging tolerance and improve harvest index. However, negative pleiotropic effects of these alleles (e.g., poor seedling emergence and reduced biomass) can cause yield losses in hot and dry environments. As part of current efforts to diversify the dwarfing alleles used in wheat breeding, we identified a quantitative trait locus (QHt.ucw-6AS) affecting plant height in the proximal region of chromosome arm 6AS (< 0.4 cM from the centromere). Using a large segregating population (~ 2800 gametes) and extensive progeny tests (70-93 plants per recombinant family), we mapped QHt.ucw-6AS as a Mendelian locus to a 0.2 cM interval (144.0-148.3 Mb, IWGSC Ref Seq v1.0) and show that it is different from Rht18. QHt.ucw-6AS is officially designated as Rht25, with Rht25a representing the height-increasing allele and Rht25b the dwarfing allele. The average dwarfing effect of Rht25b was found to be approximately half of the effect observed for Rht-B1b and Rht-D1b, and the effect is greater in the presence of the height-increasing Rht-B1a and Rht-D1a alleles than in the presence of the dwarfing alleles. Rht25b is gibberellin-sensitive and shows significant pleiotropic effects on coleoptile length, heading date, spike length, spikelet number, spikelet density, and grain weight. Rht25 represents a new alternative dwarfing locus that should be evaluated for its potential to improve wheat yield in different environments.

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Year:  2018        PMID: 29959472     DOI: 10.1007/s00122-018-3130-6

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  34 in total

1.  A wheat intervarietal genetic linkage map based on microsatellite and target region amplified polymorphism markers and its utility for detecting quantitative trait loci.

Authors:  Z H Liu; J A Anderson; J Hu; T L Friesen; J B Rasmussen; J D Faris
Journal:  Theor Appl Genet       Date:  2005-07-15       Impact factor: 5.699

2.  A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data.

Authors:  Heng Li
Journal:  Bioinformatics       Date:  2011-09-08       Impact factor: 6.937

Review 3.  Gibberellin signaling: a theme and variations on DELLA repression.

Authors:  Amber L Hauvermale; Tohru Ariizumi; Camille M Steber
Journal:  Plant Physiol       Date:  2012-07-27       Impact factor: 8.340

4.  Mapping of quantitative trait loci determining agronomic important characters in hexaploid wheat ( Triticum aestivum L.).

Authors:  A. Börner; E. Schumann; A. Fürste; H. Cöster; B. Leithold; S. Röder; E. Weber
Journal:  Theor Appl Genet       Date:  2002-06-21       Impact factor: 5.699

5.  A novel class of plant-specific zinc-dependent DNA-binding protein that binds to A/T-rich DNA sequences.

Authors:  Y Nagano; H Furuhashi; T Inaba; Y Sasaki
Journal:  Nucleic Acids Res       Date:  2001-10-15       Impact factor: 16.971

6.  Rht18 Semidwarfism in Wheat Is Due to Increased GA 2-oxidaseA9 Expression and Reduced GA Content.

Authors:  Brett A Ford; Eloise Foo; Robert Sharwood; Miroslava Karafiatova; Jan Vrána; Colleen MacMillan; David S Nichols; Burkhard Steuernagel; Cristobal Uauy; Jaroslav Doležel; Peter M Chandler; Wolfgang Spielmeyer
Journal:  Plant Physiol       Date:  2018-03-15       Impact factor: 8.340

7.  MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations.

Authors:  E S Lander; P Green; J Abrahamson; A Barlow; M J Daly; S E Lincoln; L A Newberg; L Newburg
Journal:  Genomics       Date:  1987-10       Impact factor: 5.736

8.  PolyMarker: A fast polyploid primer design pipeline.

Authors:  Ricardo H Ramirez-Gonzalez; Cristobal Uauy; Mario Caccamo
Journal:  Bioinformatics       Date:  2015-02-02       Impact factor: 6.937

Review 9.  The genes of the Green Revolution.

Authors:  Peter Hedden
Journal:  Trends Genet       Date:  2003-01       Impact factor: 11.639

10.  A QTL on chromosome 6A in bread wheat (Triticum aestivum) is associated with longer coleoptiles, greater seedling vigour and final plant height.

Authors:  W Spielmeyer; J Hyles; P Joaquim; F Azanza; D Bonnett; M E Ellis; C Moore; R A Richards
Journal:  Theor Appl Genet       Date:  2007-04-11       Impact factor: 5.574

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  32 in total

1.  Identification of modifiers of the plant height in wheat using an induced dwarf mutant controlled by RhtB4c allele.

Authors:  Priyanka Agarwal; H S Balyan; P K Gupta
Journal:  Physiol Mol Biol Plants       Date:  2020-11-19

2.  The fine mapping of dwarf gene Rht5 in bread wheat and its effects on plant height and main agronomic traits.

Authors:  Chunge Cui; Qiumei Lu; Zhangchen Zhao; Shan Lu; Shan Duan; Yang Yang; Yue Qiao; Liang Chen; Yin-Gang Hu
Journal:  Planta       Date:  2022-05-04       Impact factor: 4.116

3.  Fine mapping and candidate gene analysis of dwarf gene Rht14 in durum wheat (Triticum durum).

Authors:  Shan Duan; Chunge Cui; Liang Chen; Zujun Yang; Yin-Gang Hu
Journal:  Funct Integr Genomics       Date:  2022-01-04       Impact factor: 3.410

4.  Introgression of chromosome 1P from Agropyron cristatum reduces leaf size and plant height to improve the plant architecture of common wheat.

Authors:  Xiao Wang; Bohui Han; Yangyang Sun; Xilu Kang; Meng Zhang; Haiming Han; Shenghui Zhou; Weihua Liu; Yuqing Lu; Xinming Yang; Xiuquan Li; Jinpeng Zhang; Xu Liu; Lihui Li
Journal:  Theor Appl Genet       Date:  2022-04-04       Impact factor: 5.699

5.  Identification and characterization of QTL for spike morphological traits, plant height and heading date derived from the D genome of natural and resynthetic allohexaploid wheat.

Authors:  Huanwen Xu; Runqi Zhang; Mingming Wang; Linghong Li; Lei Yan; Zhen Wang; Jun Zhu; Xiyong Chen; Aiju Zhao; Zhenqi Su; Jiewen Xing; Qixin Sun; Zhongfu Ni
Journal:  Theor Appl Genet       Date:  2021-10-21       Impact factor: 5.699

6.  A GBS-based GWAS analysis of adaptability and yield traits in bread wheat (Triticum aestivum L.).

Authors:  Saba Akram; Mian Abdur Rehman Arif; Amjad Hameed
Journal:  J Appl Genet       Date:  2020-10-30       Impact factor: 3.240

7.  Dissection of genetic factors underlying grain size and fine mapping of QTgw.cau-7D in common wheat (Triticum aestivum L.).

Authors:  Zhaoyan Chen; Xuejiao Cheng; Lingling Chai; Zhihui Wang; Ruolin Bian; Jiang Li; Aiju Zhao; Mingming Xin; Weilong Guo; Zhaorong Hu; Huiru Peng; Yingyin Yao; Qixin Sun; Zhongfu Ni
Journal:  Theor Appl Genet       Date:  2019-09-30       Impact factor: 5.699

8.  QTL mapping for yield-related traits in wheat based on four RIL populations.

Authors:  Junmei Hu; Xiaoqian Wang; Hongwei Wang; Guangxu Zhang; Peng Jiang; Wuying Chen; Yongchao Hao; Xin Ma; Shoushen Xu; Jizeng Jia; Lingrang Kong
Journal:  Theor Appl Genet       Date:  2020-01-02       Impact factor: 5.699

9.  Mapping QTL for agronomic traits under two levels of salt stress in a new constructed RIL wheat population.

Authors:  Qiaoling Luo; Qi Zheng; Pan Hu; Liqin Liu; Guotang Yang; Hongwei Li; Bin Li; Zhensheng Li
Journal:  Theor Appl Genet       Date:  2020-09-29       Impact factor: 5.699

10.  Identification and validation of two major QTLs for spike compactness and length in bread wheat (Triticum aestivum L.) showing pleiotropic effects on yield-related traits.

Authors:  Tao Li; Guangbing Deng; Yan Su; Zhao Yang; Yanyan Tang; Jinhui Wang; Xvebing Qiu; Xi Pu; Jun Li; Zehou Liu; Haili Zhang; Junjun Liang; Wuyun Yang; Maoqun Yu; Yuming Wei; Hai Long
Journal:  Theor Appl Genet       Date:  2021-07-26       Impact factor: 5.699

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