Literature DB >> 29944459

Role of TAF15b in transcriptional regulation of autonomous pathway for flowering.

H Eom1,2, I Lee1,3.   

Abstract

The autonomous pathway promotes flowering by repressing a major flowering repressor, FLOWERING LOCUS C (FLC). Approximately 30 genes are involved in this pathway, and several of them are related to RNA processing; however, the molecular basis of the transcriptional regulation of FLC is yet to be understood. Recently, we discovered a new autonomous pathway gene, TATA-binding protein-associated factor 15b (TAF15b), which has a RNA recognition motif (RRM) and represses the level of FLC transcripts. TAF15b regulates the expression of FLC by directly interacting with RNA polymerase II (Pol II) at the transcription start sites on both the sense and antisense strands of the FLC locus. In addition to the transcriptional regulation in the nucleus, TAF15b accumulates in processing bodies (p-bodies), which are cytoplasmic RNA granules involved in translational repression, during heat stress. Here we discuss the implications of our findings and suggest a dual role of TAF15b in both transcriptional and translational regulation.

Keywords:  FLC; RNA polymerase II; TAF15b; autonomous pathway; flowering time; transcriptional regulation

Mesh:

Substances:

Year:  2018        PMID: 29944459      PMCID: PMC6128682          DOI: 10.1080/15592324.2018.1471300

Source DB:  PubMed          Journal:  Plant Signal Behav        ISSN: 1559-2316


  19 in total

Review 1.  P-bodies and stress granules: possible roles in the control of translation and mRNA degradation.

Authors:  Carolyn J Decker; Roy Parker
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-09-01       Impact factor: 10.005

2.  TAF15b, involved in the autonomous pathway for flowering, represses transcription of FLOWERING LOCUS C.

Authors:  Hyunjoo Eom; Su Jung Park; Min Kyung Kim; Hoyeun Kim; Hunseung Kang; Ilha Lee
Journal:  Plant J       Date:  2017-11-30       Impact factor: 6.417

3.  A gene loop containing the floral repressor FLC is disrupted in the early phase of vernalization.

Authors:  Pedro Crevillén; Cagla Sonmez; Zhe Wu; Caroline Dean
Journal:  EMBO J       Date:  2012-12-07       Impact factor: 11.598

Review 4.  Research progress on the autonomous flowering time pathway in Arabidopsis.

Authors:  Jing-Zhi Cheng; Yu-Ping Zhou; Tian-Xiao Lv; Chu-Ping Xie; Chang-En Tian
Journal:  Physiol Mol Biol Plants       Date:  2017-06-26

5.  Arabidopsis TAF15b Localizes to RNA Processing Bodies and Contributes to snc1-Mediated Autoimmunity.

Authors:  Oliver X Dong; Louis-Valentin Meteignier; Melodie B Plourde; Bulbul Ahmed; Ming Wang; Cassandra Jensen; Hailing Jin; Peter Moffett; Xin Li; Hugo Germain
Journal:  Mol Plant Microbe Interact       Date:  2016-03-14       Impact factor: 4.171

6.  FUS binds the CTD of RNA polymerase II and regulates its phosphorylation at Ser2.

Authors:  Jacob C Schwartz; Christopher C Ebmeier; Elaine R Podell; Joseph Heimiller; Dylan J Taatjes; Thomas R Cech
Journal:  Genes Dev       Date:  2012-12-15       Impact factor: 11.361

7.  Phosphorylation-regulated binding of RNA polymerase II to fibrous polymers of low-complexity domains.

Authors:  Ilmin Kwon; Masato Kato; Siheng Xiang; Leeju Wu; Pano Theodoropoulos; Hamid Mirzaei; Tina Han; Shanhai Xie; Jeffry L Corden; Steven L McKnight
Journal:  Cell       Date:  2013-11-21       Impact factor: 41.582

8.  RNA seeds higher-order assembly of FUS protein.

Authors:  Jacob C Schwartz; Xueyin Wang; Elaine R Podell; Thomas R Cech
Journal:  Cell Rep       Date:  2013-11-21       Impact factor: 9.423

9.  The multifunctional FUS, EWS and TAF15 proto-oncoproteins show cell type-specific expression patterns and involvement in cell spreading and stress response.

Authors:  Mattias K Andersson; Anders Ståhlberg; Yvonne Arvidsson; Anita Olofsson; Henrik Semb; Göran Stenman; Ola Nilsson; Pierre Aman
Journal:  BMC Cell Biol       Date:  2008-07-11       Impact factor: 4.241

Review 10.  Prion-like domains as epigenetic regulators, scaffolds for subcellular organization, and drivers of neurodegenerative disease.

Authors:  Zachary M March; Oliver D King; James Shorter
Journal:  Brain Res       Date:  2016-03-18       Impact factor: 3.252

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