| Literature DB >> 29942264 |
Jin-Bo Chen1, Meng Zhang2, Yu Cui1, Pei-Hua Liu1, Yan-Wei Qi3, Chao Li1, Xu Cheng1, Wen-Biao Ren1, Qia-Qia Li1, Long-Fei Liu1, Min-Feng Chen1, He-Qun Chen1, Xiong-Bing Zu1.
Abstract
Objective: Previous studies indicated potential associations between polymorphisms in genes of VEGF/hypoxia/angiogenesis pathway and risk of urogenital carcinomas However, the results were controversial and inconclusive. Here, we conducted an in-depth meta-analysis to investigate the precise associations between polymorphisms in VEGF/hypoxia/angiogenesis related genes and risk of urogenital carcinomas.Entities:
Keywords: VEGF/hypoxia/angiogenesis; meta-analysis; polymorphism; susceptibility; urogenital carcinomas
Year: 2018 PMID: 29942264 PMCID: PMC6004409 DOI: 10.3389/fphys.2018.00715
Source DB: PubMed Journal: Front Physiol ISSN: 1664-042X Impact factor: 4.566
Detail characteristics of enrolled studies.
| VEGF-rs10434 | Abe et al., | Asian | HB | RCC | 113 | 31 | 1 | 109 | 33 | 3 | Y |
| Shen et al., | Asian | HB | RCC | 152 | 170 | 39 | 166 | 164 | 30 | Y | |
| Lu et al., | Asian | HB | RCC | 172 | 191 | 49 | 365 | 375 | 85 | Y | |
| VEGF-rs1570360 | McCarron et al., | Caucasian | PB | PCa | 114 | 109 | 15 | 120 | 109 | 34 | Y |
| Sfar et al., | Caucasian | HB | PCa | 58 | 37 | 6 | 36 | 50 | 14 | Y | |
| Garcia-Closas et al., | Caucasian | HB | BCa | 431 | 383 | 78 | 389 | 407 | 82 | Y | |
| Jacobs et al., | Caucasian | PB | PCa | 557 | 489 | 126 | 210 | 194 | 54 | Y | |
| Ricketts et al., | Caucasian | PB | RCC | 134 | 143 | 47 | 146 | 130 | 38 | Y | |
| Bruyère et al., | Caucasian | PB | RCC | 27 | 17 | 5 | 94 | 83 | 25 | Y | |
| Yang et al., | Asian | HB | BCa | 224 | 187 | 69 | 213 | 162 | 45 | Y | |
| Xian et al., | Asian | HB | RCC | 115 | 112 | 39 | 232 | 220 | 80 | N | |
| VEGF-rs2010963 | Sfar et al., | Caucasian | HB | PCa | 29 | 57 | 15 | 44 | 46 | 10 | Y |
| Garcia-Closas et al., | Caucasian | HB | BCa | 388 | 395 | 98 | 387 | 396 | 93 | Y | |
| Bruyère et al., | Caucasian | PB | RCC | 15 | 25 | 8 | 86 | 92 | 20 | Y | |
| Sáenz-López et al., | Caucasian | PB | RCC | 101 | 93 | 20 | 129 | 118 | 32 | Y | |
| Qin et al., | Asian | HB | RCC | 287 | 391 | 146 | 410 | 429 | 144 | Y | |
| Shen et al., | Asian | HB | RCC | 121 | 170 | 69 | 134 | 163 | 63 | Y | |
| Lu et al., | Asian | HB | RCC | 139 | 194 | 79 | 299 | 377 | 148 | Y | |
| Xian et al., | Asian | HB | RCC | 30 | 132 | 104 | 49 | 256 | 227 | Y | |
| VEGF-rs3025039 | Abe et al., | Asian | HB | RCC | 97 | 41 | 7 | 90 | 52 | 3 | Y |
| Sfar et al., | Caucasian | HB | PCa | 79 | 20 | 2 | 72 | 27 | 1 | Y | |
| Garcia-Closas et al., | Caucasian | HB | BCa | 852 | 217 | 17 | 787 | 385 | 11 | N | |
| Bruyère et al., | Caucasian | PB | RCC | 29 | 17 | 1 | 141 | 53 | 2 | Y | |
| Sáenz-López et al., | Caucasian | PB | RCC | 156 | 57 | 2 | 200 | 73 | 7 | Y | |
| Wang et al., | Asian | HB | BCa | 293 | 153 | 24 | 539 | 275 | 36 | Y | |
| Yang et al., | Asian | HB | BCa | 307 | 149 | 24 | 284 | 121 | 15 | Y | |
| Shen et al., | Asian | HB | RCC | 224 | 81 | 55 | 240 | 73 | 46 | N | |
| Lu et al., | Asian | HB | RCC | 262 | 91 | 59 | 554 | 166 | 105 | N | |
| Xian et al., | Asian | HB | RCC | 70 | 127 | 69 | 196 | 236 | 100 | Y | |
| VEGF-rs699947 | Kim et al., | Asian | HB | BCa | 13 | 69 | 71 | 11 | 69 | 73 | Y |
| Garcia-Closas et al., | Caucasian | HB | BCa | 261 | 471 | 220 | 268 | 447 | 214 | Y | |
| VanCleave et al., | Mixed | PB | PCa | 125 | 53 | 12 | 402 | 198 | 35 | Y | |
| Ajaz et al., | Asian | NA | RCC | 30 | 81 | 32 | 44 | 41 | 21 | Y | |
| Henríquez-Hernández et al., | Caucasian | HB | BCa | 11 | 25 | 23 | 14 | 16 | 13 | Y | |
| Sáenz-López et al., | Caucasian | PB | RCC | 54 | 114 | 48 | 77 | 142 | 53 | Y | |
| Ianni et al., | Caucasian | HB | PCa | 115 | 54 | 55 | 75 | 57 | 24 | N | |
| Jaiswal et al., | Asian | HB | BCa | 67 | 116 | 17 | 106 | 112 | 32 | Y | |
| Martinez-Fierro et al., | Caucasian | HB | PCa | 37 | 38 | 2 | 70 | 78 | 24 | Y | |
| Shen et al., | Asian | HB | RCC | 150 | 149 | 61 | 178 | 141 | 41 | Y | |
| Lu et al., | Asian | HB | RCC | 171 | 174 | 67 | 397 | 332 | 95 | N | |
| Xian et al., | Asian | HB | RCC | 99 | 119 | 48 | 243 | 225 | 64 | Y | |
| VEGF-rs833061 | Lin et al., | Asian | HB | PCa | 60 | 32 | 4 | 43 | 72 | 4 | N |
| Fukuda et al., | Asian | HB | PCa | 143 | 103 | 24 | 132 | 97 | 23 | Y | |
| Garcia-Closas et al., | Caucasian | HB | BCa | 237 | 434 | 216 | 243 | 432 | 198 | Y | |
| Onen et al., | Mixed | PB | PCa | 33 | 89 | 11 | 50 | 94 | 13 | N | |
| Bruyère et al., | Caucasian | PB | RCC | 19 | 29 | 1 | 47 | 109 | 46 | Y | |
| Sáenz-López et al., | Caucasian | PB | RCC | 56 | 111 | 49 | 77 | 138 | 58 | Y | |
| Wang et al., | Asian | HB | BCa | 255 | 178 | 37 | 475 | 307 | 68 | Y | |
| Lu et al., | Asian | HB | RCC | 228 | 93 | 91 | 513 | 168 | 143 | N | |
| HIF1α-rs11549465 | Clifford et al., | Caucasian | HB | RCC | 42 | 6 | 0.1 | 110 | 27 | 6 | N |
| Chau et al., | Mixed | NA | PCa | 161 | 29 | 6 | 179 | 14 | 3 | N | |
| Orr-Urtreger et al., | Caucasian | PB | PCa | 287 | 99 | 16 | 217 | 80 | 3 | Y | |
| Li et al., | Mixed | PB | PCa | 818 | 209 | 14 | 995 | 221 | 18 | Y | |
| Jacobs et al., | Mixed | PB | PCa | 1156 | 252 | 12 | 1138 | 284 | 28 | N | |
| Nadaoka et al., | Asian | HB | BCa | 197 | 21 | 1 | 419 | 42 | 0.1 | Y | |
| Foley et al., | Caucasian | PB | PCa | 65 | 30 | 0.1 | 175 | 13 | 0.1 | Y | |
| Morris et al., | Caucasian | PB | RCC | 290 | 39 | 3 | 262 | 46 | 5 | Y | |
| Li et al., | Asian | HB | PCa | 612 | 48 | 2 | 659 | 57 | 0.1 | Y | |
| Qin et al., | Asian | HB | RCC | 572 | 46 | 2 | 578 | 43 | 2 | Y | |
| Fraga et al., | Caucasian | HB | PCa | 579 | 164 | 11 | 566 | 156 | 14 | Y | |
| HIF1α-rs11549467 | Clifford et al., | Caucasian | HB | RCC | 47 | 1 | 0.1 | 140 | 4 | 0.1 | Y |
| Chau et al., | Mixed | NA | PCa | 195 | 1 | 0.1 | 196 | 0.1 | 0.1 | N | |
| Orr-Urtreger et al., | Caucasian | PB | PCa | 198 | 2 | 0.1 | 298 | 2 | 0.1 | Y | |
| Li et al., | Mixed | PB | PCa | 1053 | 13 | 0.1 | 1247 | 17 | 0.1 | Y | |
| Nadaoka et al., | Asian | HB | BCa | 204 | 13 | 2 | 421 | 40 | 0.1 | Y | |
| Morris et al., | Caucasian | PB | RCC | 313 | 10 | 2 | 294 | 15 | 0.1 | Y | |
| Li et al., | Asian | HB | PCa | 614 | 47 | 1 | 685 | 31 | 0.1 | Y | |
| Qin et al., | Asian | HB | RCC | 575 | 45 | 0.1 | 584 | 39 | 0.1 | Y | |
| eNOS-rs1799983 | Medeiros et al., | Caucasian | HB | PCa | 49 | 61 | 15 | 70 | 65 | 18 | Y |
| Marangoni et al., | Caucasian | HB | PCa | 30 | 50 | 4 | 30 | 29 | 6 | Y | |
| Jacobs et al., | Caucasian | PB | PCa | 659 | 632 | 129 | 682 | 600 | 164 | Y | |
| Lee et al., | Caucasian | PB | PCa | 517 | 468 | 103 | 607 | 557 | 129 | Y | |
| Lee et al., | Mixed | PB | PCa | 77 | 20 | 0.1 | 280 | 88 | 5 | Y | |
| Ryk et al., | Caucasian | PB | BCa | 128 | 106 | 28 | 75 | 62 | 13 | Y | |
| Ziaei et al., | Caucasian | HB | PCa | 44 | 23 | 11 | 48 | 33 | 6 | Y | |
| Safarinejad et al., | Caucasian | HB | PCa | 120 | 48 | 2 | 248 | 89 | 3 | Y | |
| Verim et al., | Caucasian | HB | BCa | 7 | 49 | 10 | 31 | 44 | 13 | Y | |
| Brankovic et al., | Caucasian | HB | PCa | 76 | 65 | 9 | 54 | 40 | 6 | Y | |
| Polat et al., | Caucasian | PB | BCa | 7 | 59 | 9 | 48 | 75 | 20 | Y | |
| Ceylan et al., | Caucasian | HB | PCa | 46 | 23 | 9 | 47 | 23 | 5 | Y | |
| Diler et al., 2016 | Caucasian | PB | PCa | 6 | 55 | 23 | 65 | 41 | 10 | Y | |
| eNOS-rs2070744 | Ryk et al., | Caucasian | PB | BCa | 152 | 142 | 40 | 84 | 63 | 8 | Y |
| Safarinejad et al., | Caucasian | HB | PCa | 52 | 93 | 25 | 150 | 159 | 31 | Y | |
| Brankovic et al., | Caucasian | HB | PCa | 54 | 68 | 28 | 34 | 51 | 15 | Y | |
| Polat et al., | Caucasian | PB | BCa | 24 | 40 | 11 | 56 | 72 | 15 | Y | |
| Diler et al., 2016 | Caucasian | PB | PCa | 30 | 30 | 24 | 47 | 56 | 13 | Y | |
| eNOS-Intron 4a/b VNTR | Medeiros et al., | Caucasian | HB | PCa | 87 | 32 | 6 | 121 | 29 | 3 | Y |
| Sanli et al., | Caucasian | HB | PCa | 87 | 40 | 5 | 104 | 48 | 6 | Y | |
| Amasyali et al., | Caucasian | HB | BCa | 52 | 63 | 8 | 137 | 59 | 5 | Y | |
| Safarinejad et al., | Caucasian | HB | PCa | 101 | 54 | 15 | 249 | 88 | 3 | Y | |
| Polat et al., | Caucasian | PB | BCa | 50 | 24 | 1 | 97 | 43 | 3 | Y | |
| Diler et al., 2016 | Caucasian | PB | PCa | 65 | 16 | 3 | 83 | 31 | 2 | Y | |
| HRAS-rs12628 | Johne et al., | Caucasian | HB | BCa | 151 | 119 | 42 | 164 | 170 | 26 | N |
| Sanyal et al., | Caucasian | PB | BCa | 153 | 147 | 2 | 54 | 61 | 6 | N | |
| Traczyk et al., | Caucasian | PB | BCa | 45 | 64 | 23 | 49 | 48 | 9 | Y | |
| Pandith et al., | Asian | HB | BCa | 90 | 42 | 8 | 135 | 25 | 0.1 | Y | |
SNP, single nucleotide polymorphism; HB, hospital-based; PB: population-based; RCC, renal cell carcinoma; PCa, prostate cancer; BCa, bladder cancer; HWE, Hardy Weinberg equilibrium; Y, controls conformed to HWE; N, controls were not conformed to HWE; Mixed, more than two ethnicities.
Figure 1Flow chart of studies selection for VEGF/hypoxia/angiogenesis genes polymorphisms. (A) Flow chart of studies selection for VEGF genes polymorphisms. (B) Flow chart of studies selection for HIF1α genes polymorphisms. (C) Flow chart of studies selection for eNOS genes polymorphisms. (D) Flow chart of studies selection for HRAS genes polymorphisms.
Representative results of meta-analysis for polymorphisms in VEGF/ Hypoxia/Angiogenesis genes and risk of Urogenital Carcinomas.
| eNOS-rs2070744 | B vs. A | Overall | 5 | 0.471 | 1.379 (1.188–1.602) | 1.379 (1.187–1.602) | |
| B vs. A | PB | 3 | 0.746 | 1.436 (1.167–1.768) | 1.437 (1.167–1.768) | ||
| B vs. A | BCa | 2 | 0.599 | 1.387 (1.089–1.767) | 1.388 (1.090–1.768) | ||
| B vs. A | PCa | 3 | 0.196 | 1.362 (1.060–1.751) | 1.373 (1.135–1.662) | ||
| BA+BB vs. AA | BCa | 2 | 0.922 | 1.402 (1.017–1.932) | 1.402 (1.017–1.932) | ||
| BA+BB vs. AA | PCa | 3 | 0.125 | 1.307 (0.865–1.974) | 1.375 (1.045–1.808) | ||
| BB vs. AA | Overall | 5 | 0.466 | 2.082 (1.481–2.926) | 2.097 (1.495–2.942) | ||
| BB vs. AA | PB | 3 | 0.657 | 2.453 (1.510–3.985) | 2.481 (1.532–4.019) | ||
| BB vs. AA | BCa | 2 | 0.438 | 2.241 (1.225–4.099) | 2.298 (1.266–4.172) | ||
| BB vs. AA | PCa | 3 | 0.235 | 2.001 (1.211–3.306) | 2.000 (1.325–3.018) | ||
| BB vs. BA+AA | Overall | 5 | 0.414 | 1.876 (1.370–2.567) | 1.898 (1.390–2.591) | ||
| BB vs. BA+AA | PB | 3 | 0.393 | 2.331 (1.481–3.668) | 2.352 (1.501–3.687) | ||
| BB vs. BA+AA | BCa | 2 | 0.358 | 1.946 (1.099–3.446) | 2.006 (1.145–3.516) | ||
| BB vs. BA+AA | PCa | 3 | 0.214 | 1.869 (1.166–2.997) | 1.848 (1.271–2.687) | ||
| eNOS-Intron 4a/b VNTR | BB vs. BA+AA | Overall | 6 | 0.109 | 2.436 (1.109–5.351) | 2.725 (1.608–4.619) | |
| BB vs. AA | BCa | 2 | 0.150 | 2.157 (0.367–12.659) | 2.661 (1.004–7.050) | ||
| eNOS-rs1799983 | B vs. A | BCa | 3 | 0.190 | 1.361 (1.024–1.809) | 1.324 (1.067–1.642) | |
| BB vs. AA | BCa | 3 | 0.229 | 2.070 (1.049–4.085) | 1.887 (1.103–3.230) | ||
| HIF1α-rs11549467 | B vs. A | PCa | 4 | 0.490 | 1.461 (1.003–2.128) | 1.465 (1.010–2.124) | |
| HRAS-rs12628 | BA+BB vs. AA | Y | 2 | 0.127 | 2.220 (1.245–3.960) | 2.211 (1.517–3.222) | |
| BB vs. AA | Y | 2 | 0.163 | 7.207 (0.158–328.963) | 4.174 (1.851–9.412) | ||
| BB vs. BA+AA | HB | 2 | 0.176 | 4.887 (0.138–172.923) | 2.396 (1.458–3.938) | ||
| VEGF-rs2010963 | BA vs. AA | RCC | 6 | 0.530 | 1.168 (1.027–1.327) | 1.168 (1.027–1.328) | |
| BA+BB vs. AA | RCC | 6 | 0.240 | 1.158 (0.996–1.346) | 1.181 (1.047–1.333) | ||
| BB vs. AA | RCC | 6 | 0.131 | 1.156 (0.910–1.468) | 1.196 (1.010–1.416) | ||
| VEGF-rs3025039 | B vs. A | Asian | 6 | 0.337 | 1.179 (1.067–1.303) | 1.180 (1.076–1.294) | |
| B vs. A | RCC | 6 | 0.195 | 1.183 (1.028–1.363) | 1.198 (1.074–1.336) | ||
| BA+BB vs. AA | RCC | 6 | 0.148 | 1.194 (0.986–1.446) | 1.205 (1.046–1.389) | ||
| BB vs. AA | Asian | 6 | 0.548 | 1.400 (1.149–1.705) | 1.401 (1.152–1.705) | ||
| BB vs. AA | HB | 8 | 0.773 | 1.404 (1.160–1.698) | 1.405 (1.163–1.699) | ||
| BB vs. AA | RCC | 6 | 0.244 | 1.394 (1.043–1.863) | 1.383 (1.111–1.721) | ||
| BB vs. BA+AA | RCC | 6 | 0.455 | 1.286 (1.046–1.582) | 1.278 (1.041–1.570) | ||
| VEGF-rs699947 | B vs. A | Asian | 6 | 0.286 | 1.273 (1.139–1.424) | 1.277 (1.158–1.408) | |
| B vs. A | RCC | 5 | 0.603 | 1.311 (1.186–1.451) | 1.312 (1.186–1.450) | ||
| BA vs. AA | Asian | 6 | 0.102 | 1.395 (1.122–1.734) | 1.352 (1.166–1.568) | ||
| BA vs. AA | RCC | 5 | 0.109 | 1.347 (1.081–1.678) | 1.306 (1.122–1.521) | ||
| BA+BB vs. AA | Asian | 6 | 0.221 | 1.427 (1.198–1.700) | 1.410 (1.226–1.620) | ||
| BA+BB vs. AA | RCC | 5 | 0.189 | 1.417 (1.179–1.703) | 1.394 (1.209–1.607) | ||
| BB vs. AA | Asian | 6 | 0.201 | 1.540 (1.185–2.003) | 1.572 (1.279–1.931) | ||
| BB vs. AA | RCC | 5 | 0.772 | 1.688 (1.372–2.076) | 1.687 (1.372–2.075) | ||
| BB vs. BA+AA | RCC | 5 | 0.780 | 1.436 (1.189–1.735) | 1.435 (1.188–1.733) |
SNP, single nucleotide polymorphism; P.
Figure 2Linkage disequilibrium analyses for VEGF, eNOS, and HIF1α polymorphisms in populations from 1,000 genomes. The number of each cell represents r2 and white color cells shows no LD between polymorphisms. Population descriptors: JPT, Japanese in Tokyo, Japan; YRI, Yoruba in Ibadan, Nigeria; CEU, Utah residents with Northern and Western European ancestry from the CEPH collection; CHB, Han Chinese in Beijing, China.