Literature DB >> 2994018

The primary structure of the DeoR repressor from Escherichia coli K-12.

P Valentin-Hansen, P Højrup, S Short.   

Abstract

The nucleotide sequence of the deoR gene of E. coli, which codes for the DeoR repressor, has been determined. This gene codes for a polypeptide that is 252 amino acids residues in length. Computer-assisted analysis of the nucleotide sequence strongly suggests that the DNA binding domain of the DeoR repressor is located in the N-terminal part of the protein. After the coding region there is a dyad symmetry similar to a palindromic unit present outside many structural genes on the E. coli chromosome.

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Year:  1985        PMID： 2994018      PMCID： PMC321923          DOI： 10.1093/nar/13.16.5927

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  33 in total

Review 1.  Regulatory sequences involved in the promotion and termination of RNA transcription.

Authors:  M Rosenberg; D Court
Journal:  Annu Rev Genet       Date:  1979       Impact factor: 16.830

2.  An operator at -280 base pairs that is required for repression of araBAD operon promoter: addition of DNA helical turns between the operator and promoter cyclically hinders repression.

Authors:  T M Dunn; S Hahn; S Ogden; R F Schleif
Journal:  Proc Natl Acad Sci U S A       Date:  1984-08       Impact factor: 11.205

3.  How ribosomes select initiator regions in mRNA: base pair formation between the 3' terminus of 16S rRNA and the mRNA during initiation of protein synthesis in Escherichia coli.

Authors:  J A Steitz; K Jakes
Journal:  Proc Natl Acad Sci U S A       Date:  1975-12       Impact factor: 11.205

Review 4.  Translational initiation in prokaryotes.

Authors:  L Gold; D Pribnow; T Schneider; S Shinedling; B S Singer; G Stormo
Journal:  Annu Rev Microbiol       Date:  1981       Impact factor: 15.500

5.  Repetitive extragenic palindromic sequences: a major component of the bacterial genome.

Authors:  M J Stern; G F Ames; N H Smith; E C Robinson; C F Higgins
Journal:  Cell       Date:  1984-07       Impact factor: 41.582

6.  The operator-binding domain of lambda repressor: structure and DNA recognition.

Authors:  C O Pabo; M Lewis
Journal:  Nature       Date:  1982-07-29       Impact factor: 49.962

Review 7.  E. coli RNA polymerase interacts homologously with two different promoters.

Authors:  U Siebenlist; R B Simpson; W Gilbert
Journal:  Cell       Date:  1980-06       Impact factor: 41.582

Review 8.  Codon catalog usage and the genome hypothesis.

Authors:  R Grantham; C Gautier; M Gouy; R Mercier; A Pavé
Journal:  Nucleic Acids Res       Date:  1980-01-11       Impact factor: 16.971

9.  Model of specific complex between catabolite gene activator protein and B-DNA suggested by electrostatic complementarity.

Authors:  I T Weber; T A Steitz
Journal:  Proc Natl Acad Sci U S A       Date:  1984-07       Impact factor: 11.205

10.  Nucleoside transport systems in Escherichia coli K12: specificity and regulation.

Authors:  A Munch-Petersen; B Mygind
Journal:  J Cell Physiol       Date:  1976-12       Impact factor: 6.384
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  29 in total

1.  A study of the CopF repressor of plasmid pAMbeta1 by phage display.

Authors:  E d'Alençon; S D Ehrlich
Journal:  J Bacteriol       Date:  2000-05       Impact factor: 3.490

2.  In vivo analysis of the regulatory genes in the nystatin biosynthetic gene cluster of Streptomyces noursei ATCC 11455 reveals their differential control over antibiotic biosynthesis.

Authors:  Olga N Sekurova; Trygve Brautaset; Håvard Sletta; Sven E F Borgos; Øyvind M Jakobsen M; Trond E Ellingsen; Arne R Strøm; Svein Valla; Sergey B Zotchev
Journal:  J Bacteriol       Date:  2004-03       Impact factor: 3.490

3.  Cloning and nucleotide sequences of the Bacillus stearothermophilus neutral protease gene and its transcriptional activator gene.

Authors:  Y Nishiya; T Imanaka
Journal:  J Bacteriol       Date:  1990-09       Impact factor: 3.490

4.  Double negative and positive control of tsx expression in Escherichia coli.

Authors:  E Bremer; P Gerlach; A Middendorf
Journal:  J Bacteriol       Date:  1988-01       Impact factor: 3.490

5.  Mosaic structure of p1658/97, a 125-kilobase plasmid harboring an active amplicon with the extended-spectrum beta-lactamase gene blaSHV-5.

Authors:  M Zienkiewicz; I Kern-Zdanowicz; M Gołebiewski; J Zyliñska; P Mieczkowski; M Gniadkowski; J Bardowski; P Cegłowski
Journal:  Antimicrob Agents Chemother       Date:  2007-01-12       Impact factor: 5.191

6.  LacR is a repressor of lacABCD and LacT is an activator of lacTFEG, constituting the lac gene cluster in Streptococcus pneumoniae.

Authors:  Muhammad Afzal; Sulman Shafeeq; Oscar P Kuipers
Journal:  Appl Environ Microbiol       Date:  2014-06-20       Impact factor: 4.792

7.  SdrA, a new DeoR family regulator involved in Streptomyces avermitilis morphological development and antibiotic production.

Authors:  Dana Ulanova; Shigeru Kitani; Eiichiro Fukusaki; Takuya Nihira
Journal:  Appl Environ Microbiol       Date:  2013-10-11       Impact factor: 4.792

Review 8.  Linkage map of Escherichia coli K-12, edition 10: the traditional map.

Authors:  M K Berlyn
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

9.  Codon usage in regulatory genes in Escherichia coli does not reflect selection for 'rare' codons.

Authors:  P M Sharp; W H Li
Journal:  Nucleic Acids Res       Date:  1986-10-10       Impact factor: 16.971

10.  Adaptation and modification of three CRISPR loci in two closely related cyanobacteria.

Authors:  Stephanie Hein; Ingeborg Scholz; Björn Voß; Wolfgang R Hess
Journal:  RNA Biol       Date:  2013-03-27       Impact factor: 4.652
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