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Literature DB >> 2994009

Nucleotide sequence of the Bacillus subtilis xylose isomerase gene: extensive homology between the Bacillus and Escherichia coli enzyme.

Abstract

The xylose isomerase gene from Bacillus subtilis was cloned from a genomic BamH1 library by complementation of an isomerase defective Escherichia coli strain as previously described. The ATG initiation codon is preceded by a Shine-Dalgarno sequence and two hexamers being characteristic for the promoter region of Bacillus genes. The structural gene consists of 1320 base pairs, thus coding for a polypeptide chain of 440 amino acids with a molecular weight of 49 680. The polypeptide primary structure shows over 50% homology to that of the E. coli xylose isomerase.

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Year: 1985 PMID： 2994009 PMCID： PMC321901 DOI： 10.1093/nar/13.15.5717

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

11 in total

1. A rapid alkaline extraction procedure for screening recombinant plasmid DNA.

Authors: H C Birnboim; J Doly
Journal: Nucleic Acids Res Date: 1979-11-24 Impact factor: 16.971

2. Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors: A M Maxam; W Gilbert
Journal: Methods Enzymol Date: 1980 Impact factor: 1.600

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Authors: R A Hogue-Angeletti
Journal: J Biol Chem Date: 1975-10-10 Impact factor: 5.157

4. Xylose isomerase from Escherichia coli. Characterization of the protein and the structural gene.

Authors: G D Schellenberg; A Sarthy; A E Larson; M P Backer; J W Crabb; M Lidstrom; B D Hall; C E Furlong
Journal: J Biol Chem Date: 1984-06-10 Impact factor: 5.157

5. Alpha-amylase genes (amyR2 and amyE+) from an alpha-amylase-hyperproducing Bacillus subtilis strain: molecular cloning and nucleotide sequences.

Authors: H Yamazaki; K Ohmura; A Nakayama; Y Takeichi; K Otozai; M Yamasaki; G Tamura; K Yamane
Journal: J Bacteriol Date: 1983-10 Impact factor: 3.490

6. Construction of a SalI/PstI restriction map of spinach chloroplast DNA using low-gelling-temperature-agarose electrophoresis.

Authors: R G Herrmann; P R Whitfeld; W Bottomley
Journal: Gene Date: 1980-01 Impact factor: 3.688

7. DNA sequencing with chain-terminating inhibitors.

Authors: F Sanger; S Nicklen; A R Coulson
Journal: Proc Natl Acad Sci U S A Date: 1977-12 Impact factor: 11.205

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Authors: C P Moran; N Lang; S F LeGrice; G Lee; M Stephens; A L Sonenshein; J Pero; R Losick
Journal: Mol Gen Genet Date: 1982

9. Selective cloning of Bacillus subtilis xylose isomerase and xylulokinase in Escherichia coli genes by IS5-mediated expression.

Authors: M Wilhelm; C P Hollenberg
Journal: EMBO J Date: 1984-11 Impact factor: 11.598

10. Molecular cloning, DNA structure and expression of the Escherichia coli D-xylose isomerase.

Authors: K A Briggs; W E Lancashire; B S Hartley
Journal: EMBO J Date: 1984-03 Impact factor: 11.598

24 in total

1. Organization, promoter analysis and transcriptional regulation of the Staphylococcus xylosus xylose utilization operon.

Authors: C Sizemore; E Buchner; T Rygus; C Witke; F Götz; W Hillen
Journal: Mol Gen Genet Date: 1991-07

2. Molecular cloning, structure, promoters and regulatory elements for transcription of the Bacillus megaterium encoded regulon for xylose utilization.

Authors: T Rygus; A Scheler; R Allmansberger; W Hillen
Journal: Arch Microbiol Date: 1991 Impact factor: 2.552

3. Identification and sequence analysis of the Bacillus subtilis W23 xylR gene and xyl operator.

Authors: P Kreuzer; D Gärtner; R Allmansberger; W Hillen
Journal: J Bacteriol Date: 1989-07 Impact factor: 3.490

4. Organization and characterization of three genes involved in D-xylose catabolism in Lactobacillus pentosus.

Authors: B C Lokman; P van Santen; J C Verdoes; J Krüse; R J Leer; M Posno; P H Pouwels
Journal: Mol Gen Genet Date: 1991-11

5. Xylose isomerase from Actinoplanes missouriensis: primary structure of the gene and the protein.

Authors: R Amore; C P Hollenberg
Journal: Nucleic Acids Res Date: 1989-09-25 Impact factor: 16.971

6. Catabolite repression of the operon for xylose utilization from Bacillus subtilis W23 is mediated at the level of transcription and depends on a cis site in the xylA reading frame.

Authors: S Jacob; R Allmansberger; D Gärtner; W Hillen
Journal: Mol Gen Genet Date: 1991-10

7. Glucose and glucose-6-phosphate interaction with Xyl repressor proteins from Bacillus spp. may contribute to regulation of xylose utilization.

Authors: M K Dahl; D Schmiedel; W Hillen
Journal: J Bacteriol Date: 1995-10 Impact factor: 3.490

8. Molecular cloning, structure, promoters and regulatory elements for transcription of the Bacillus licheniformis encoded regulon for xylose utilization.

Authors: A Scheler; T Rygus; R Allmansberger; W Hillen
Journal: Arch Microbiol Date: 1991 Impact factor: 2.552

9. Genetic organization and regulation of the xylose degradation genes in Streptomyces rubiginosus.

Authors: H C Wong; Y Ting; H C Lin; F Reichert; K Myambo; K W Watt; P L Toy; R J Drummond
Journal: J Bacteriol Date: 1991-11 Impact factor: 3.490

10. Purification and cloning of a thermostable xylose (glucose) isomerase with an acidic pH optimum from Thermoanaerobacterium strain JW/SL-YS 489.

Authors: S Y Liu; J Wiegel; F C Gherardini
Journal: J Bacteriol Date: 1996-10 Impact factor: 3.490