Literature DB >> 29939747

Merging In-Solution X-ray and Neutron Scattering Data Allows Fine Structural Analysis of Membrane-Protein Detergent Complexes.

Gaëtan Dias Mirandela1, Giulia Tamburrino2,3, Miloš T Ivanović4, Felix M Strnad5, Olwyn Byron6, Tim Rasmussen7, Paul A Hoskisson1, Jochen S Hub4, Ulrich Zachariae2,3, Frank Gabel8,9, Arnaud Javelle1.   

Abstract

In-solution small-angle X-ray and neutron scattering (SAXS/SANS) have become popular methods to characterize the structure of membrane proteins, solubilized by either detergents or nanodiscs. SANS studies of protein-detergent complexes usually require deuterium-labeled proteins or detergents, which in turn often lead to problems in their expression or purification. Here, we report an approach whose novelty is the combined analysis of SAXS and SANS data from an unlabeled membrane protein complex in solution in two complementary ways. First, an explicit atomic analysis, including both protein and detergent molecules, using the program WAXSiS, which has been adapted to predict SANS data. Second, the use of MONSA which allows one to discriminate between detergent head- and tail-groups in an ab initio approach. Our approach is readily applicable to any detergent-solubilized protein and provides more detailed structural information on protein-detergent complexes from unlabeled samples than SAXS or SANS alone.

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Year:  2018        PMID: 29939747     DOI: 10.1021/acs.jpclett.8b01598

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  4 in total

Review 1.  Hybrid methods for combined experimental and computational determination of protein structure.

Authors:  Justin T Seffernick; Steffen Lindert
Journal:  J Chem Phys       Date:  2020-12-28       Impact factor: 3.488

2.  A two-lane mechanism for selective biological ammonium transport.

Authors:  Gordon Williamson; Giulia Tamburrino; Adriana Bizior; Mélanie Boeckstaens; Gaëtan Dias Mirandela; Marcus G Bage; Andrei Pisliakov; Callum M Ives; Eilidh Terras; Paul A Hoskisson; Anna Maria Marini; Ulrich Zachariae; Arnaud Javelle
Journal:  Elife       Date:  2020-07-14       Impact factor: 8.140

3.  Coexistence of Ammonium Transporter and Channel Mechanisms in Amt-Mep-Rh Twin-His Variants Impairs the Filamentation Signaling Capacity of Fungal Mep2 Transceptors.

Authors:  Gordon Williamson; Ana Sofia Brito; Adriana Bizior; Giulia Tamburrino; Gaëtan Dias Mirandela; Thomas Harris; Paul A Hoskisson; Ulrich Zachariae; Anna Maria Marini; Mélanie Boeckstaens; Arnaud Javelle
Journal:  mBio       Date:  2022-03-01       Impact factor: 7.786

Review 4.  Viewing SARS-CoV-2 Nucleocapsid Protein in Terms of Molecular Flexibility.

Authors:  Tatsuhito Matsuo
Journal:  Biology (Basel)       Date:  2021-05-21
  4 in total

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