Literature DB >> 29934898

Computational Toxicology Methods in Chemical Library Design and High-Throughput Screening Hit Validation.

Kirk E Hevener1.   

Abstract

The discovery of molecular toxicity in a clinical drug candidate can have a significant impact on both the cost and timeline of the drug discovery process. Early identification of potentially toxic compounds during screening library preparation or, alternatively, during the hit validation process, is critical to ensure that valuable time and resources are not spent pursuing compounds that may possess a high propensity for human toxicity. This chapter focuses on the application of computational molecular filters, applied either prescreening or postscreening, to identify and remove known reactive and/or potentially toxic compounds from consideration in drug discovery campaigns.

Entities:  

Keywords:  Computational filter; Drug discovery; High-throughput screening; Library design; Molecular toxicity; Virtual screening

Mesh:

Substances:

Year:  2018        PMID: 29934898      PMCID: PMC6088382          DOI: 10.1007/978-1-4939-7899-1_13

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  35 in total

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Authors:  M D Barratt
Journal:  Cell Biol Toxicol       Date:  2000       Impact factor: 6.691

Review 2.  ADMET in silico modelling: towards prediction paradise?

Authors:  Han van de Waterbeemd; Eric Gifford
Journal:  Nat Rev Drug Discov       Date:  2003-03       Impact factor: 84.694

Review 3.  Early prediction of drug metabolism and toxicity: systems biology approach and modeling.

Authors:  Andrej Bugrim; Tatiana Nikolskaya; Yuri Nikolsky
Journal:  Drug Discov Today       Date:  2004-02-01       Impact factor: 7.851

Review 4.  Toward in silico structure-based ADMET prediction in drug discovery.

Authors:  Gautier Moroy; Virginie Y Martiny; Philippe Vayer; Bruno O Villoutreix; Maria A Miteva
Journal:  Drug Discov Today       Date:  2011-10-29       Impact factor: 7.851

5.  Derivation and validation of toxicophores for mutagenicity prediction.

Authors:  Jeroen Kazius; Ross McGuire; Roberta Bursi
Journal:  J Med Chem       Date:  2005-01-13       Impact factor: 7.446

6.  An empirical process for the design of high-throughput screening deck filters.

Authors:  Bradley C Pearce; Michael J Sofia; Andrew C Good; Dieter M Drexler; David A Stock
Journal:  J Chem Inf Model       Date:  2006 May-Jun       Impact factor: 4.956

7.  Physiochemical drug properties associated with in vivo toxicological outcomes.

Authors:  Jason D Hughes; Julian Blagg; David A Price; Simon Bailey; Gary A Decrescenzo; Rajesh V Devraj; Edmund Ellsworth; Yvette M Fobian; Michael E Gibbs; Richard W Gilles; Nigel Greene; Enoch Huang; Teresa Krieger-Burke; Jens Loesel; Travis Wager; Larry Whiteley; Yao Zhang
Journal:  Bioorg Med Chem Lett       Date:  2008-07-24       Impact factor: 2.823

8.  New substructure filters for removal of pan assay interference compounds (PAINS) from screening libraries and for their exclusion in bioassays.

Authors:  Jonathan B Baell; Georgina A Holloway
Journal:  J Med Chem       Date:  2010-04-08       Impact factor: 7.446

9.  FAF-Drugs3: a web server for compound property calculation and chemical library design.

Authors:  David Lagorce; Olivier Sperandio; Jonathan B Baell; Maria A Miteva; Bruno O Villoutreix
Journal:  Nucleic Acids Res       Date:  2015-04-16       Impact factor: 16.971

10.  PAINS in the assay: chemical mechanisms of assay interference and promiscuous enzymatic inhibition observed during a sulfhydryl-scavenging HTS.

Authors:  Jayme L Dahlin; J Willem M Nissink; Jessica M Strasser; Subhashree Francis; LeeAnn Higgins; Hui Zhou; Zhiguo Zhang; Michael A Walters
Journal:  J Med Chem       Date:  2015-02-21       Impact factor: 8.039

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  1 in total

1.  Thermal Bioprinting Causes Ample Alterations of Expression of LUCAT1, IL6, CCL26, and NRN1L Genes and Massive Phosphorylation of Critical Oncogenic Drug Resistance Pathways in Breast Cancer Cells.

Authors:  Aleli Campbell; Jonathon E Mohl; Denisse A Gutierrez; Armando Varela-Ramirez; Thomas Boland
Journal:  Front Bioeng Biotechnol       Date:  2020-02-21
  1 in total

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