Literature DB >> 29934399

Genome diversity of the potato.

Binquan Huang1, David M Spooner2,3, Qiqi Liang4.   

Abstract

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Year:  2018        PMID： 29934399      PMCID： PMC6048492          DOI： 10.1073/pnas.1805917115

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


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  8 in total

1.  How do we address the disconnect between genetic and morphological diversity in germplasm collections?

Authors:  Shelley H Jansky; Julie Dawson; David M Spooner
Journal:  Am J Bot       Date:  2015-07-16       Impact factor: 3.844

2.  Asymmetric subgenome selection and cis-regulatory divergence during cotton domestication.

Authors:  Maojun Wang; Lili Tu; Min Lin; Zhongxu Lin; Pengcheng Wang; Qingyong Yang; Zhengxiu Ye; Chao Shen; Jianying Li; Lin Zhang; Xiaolin Zhou; Xinhui Nie; Zhonghua Li; Kai Guo; Yizan Ma; Cong Huang; Shuangxia Jin; Longfu Zhu; Xiyan Yang; Ling Min; Daojun Yuan; Qinghua Zhang; Keith Lindsey; Xianlong Zhang
Journal:  Nat Genet       Date:  2017-03-06       Impact factor: 38.330

3.  Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean.

Authors:  Zhengkui Zhou; Yu Jiang; Zheng Wang; Zhiheng Gou; Jun Lyu; Weiyu Li; Yanjun Yu; Liping Shu; Yingjun Zhao; Yanming Ma; Chao Fang; Yanting Shen; Tengfei Liu; Congcong Li; Qing Li; Mian Wu; Min Wang; Yunshuai Wu; Yang Dong; Wenting Wan; Xiao Wang; Zhaoli Ding; Yuedong Gao; Hui Xiang; Baoge Zhu; Suk-Ha Lee; Wen Wang; Zhixi Tian
Journal:  Nat Biotechnol       Date:  2015-02-02       Impact factor: 54.908

4.  Genomic analyses provide insights into the history of tomato breeding.

Authors:  Tao Lin; Guangtao Zhu; Junhong Zhang; Xiangyang Xu; Qinghui Yu; Zheng Zheng; Zhonghua Zhang; Yaoyao Lun; Shuai Li; Xiaoxuan Wang; Zejun Huang; Junming Li; Chunzhi Zhang; Taotao Wang; Yuyang Zhang; Aoxue Wang; Yancong Zhang; Kui Lin; Chuanyou Li; Guosheng Xiong; Yongbiao Xue; Andrea Mazzucato; Mathilde Causse; Zhangjun Fei; James J Giovannoni; Roger T Chetelat; Dani Zamir; Thomas Städler; Jingfu Li; Zhibiao Ye; Yongchen Du; Sanwen Huang
Journal:  Nat Genet       Date:  2014-10-12       Impact factor: 38.330

5.  Genomic Analyses Yield Markers for Identifying Agronomically Important Genes in Potato.

Authors:  Yangping Li; Christophe Colleoni; Junjie Zhang; Qiqi Liang; Yufeng Hu; Holly Ruess; Reinhard Simon; Yinghong Liu; Hanmei Liu; Guowu Yu; Eric Schmitt; Chloé Ponitzki; Guangjian Liu; Huanhuan Huang; Feilong Zhan; Lin Chen; Yubi Huang; David Spooner; Binquan Huang
Journal:  Mol Plant       Date:  2018-02-05       Impact factor: 13.164

6.  Whole-genome resequencing of 292 pigeonpea accessions identifies genomic regions associated with domestication and agronomic traits.

Authors:  Rajeev K Varshney; Rachit K Saxena; Hari D Upadhyaya; Aamir W Khan; Yue Yu; Changhoon Kim; Abhishek Rathore; Dongseon Kim; Jihun Kim; Shaun An; Vinay Kumar; Ghanta Anuradha; Kalinati Narasimhan Yamini; Wei Zhang; Sonnappa Muniswamy; Jong-So Kim; R Varma Penmetsa; Eric von Wettberg; Swapan K Datta
Journal:  Nat Genet       Date:  2017-05-22       Impact factor: 38.330

7.  From FastQ data to high confidence variant calls: the Genome Analysis Toolkit best practices pipeline.

Authors:  Geraldine A Van der Auwera; Mauricio O Carneiro; Christopher Hartl; Ryan Poplin; Guillermo Del Angel; Ami Levy-Moonshine; Tadeusz Jordan; Khalid Shakir; David Roazen; Joel Thibault; Eric Banks; Kiran V Garimella; David Altshuler; Stacey Gabriel; Mark A DePristo
Journal:  Curr Protoc Bioinformatics       Date:  2013

8.  Genome diversity of tuber-bearing Solanum uncovers complex evolutionary history and targets of domestication in the cultivated potato.

Authors:  Michael A Hardigan; F Parker E Laimbeer; Linsey Newton; Emily Crisovan; John P Hamilton; Brieanne Vaillancourt; Krystle Wiegert-Rininger; Joshua C Wood; David S Douches; Eva M Farré; Richard E Veilleux; C Robin Buell
Journal:  Proc Natl Acad Sci U S A       Date:  2017-10-30       Impact factor: 11.205
  8 in total
  1 in total

1.  Reply to Huang et al.: Avoiding "one-size-fits-all" approaches to variant discovery.

Authors:  Michael A Hardigan; F Parker E Laimbeer; John P Hamilton; Brieanne Vaillancourt; David S Douches; Eva M Farré; Richard E Veilleux; C Robin Buell
Journal:  Proc Natl Acad Sci U S A       Date:  2018-06-22       Impact factor: 11.205
  1 in total

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