| Literature DB >> 29927978 |
Patrick C Eschenfeldt1,2,3, Uri Kartoun4, Curtis R Heberle1,2, Chung Yin Kong1,3, Norman S Nishioka2,3, Kenney Ng4, Sagar Kamarthi5, Chin Hur1,2,3.
Abstract
BACKGROUND & AIMS: A common limiting factor in the throughput of gastrointestinal endoscopy units is the availability of space for patients to recover post-procedure. This study sought to identify predictors of abnormally long recovery time after colonoscopy performed with procedural sedation. In clinical research, this type of study would be performed using only one regression modeling approach. A goal of this study was to apply various "machine learning" techniques to see if better prediction could be achieved.Entities:
Mesh:
Substances:
Year: 2018 PMID: 29927978 PMCID: PMC6013091 DOI: 10.1371/journal.pone.0199246
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Histogram of recovery time with cumulative frequency.
Distribution of recovery time among studied population, showing definition of long recovery. For readability, the 71 (1.4%) procedures with recovery time above 200 minutes are excluded from the figure.
Fig 2Recovery time averaged by day.
Daily mean recovery time over the study period with a local regression (LOESS) fitted curve.
Fig 3Use of fentanyl and meperidine over time.
Daily percentage of procedures using fentanyl and meperidine over time, with LOESS fitted curves.
Procedure characteristics by recovery time.
| Variable | Recovery Time | p value | |
|---|---|---|---|
| ≤ 85 min | > 85 min | ||
| Patient Demographics | |||
| Female (%) | 48.38 | 61.75 | <0.0001 |
| Age (median (IQR)) | 59 (51, 67) | 59 (50, 67) | 0.0194 |
| ASA Class | 0.0032 | ||
| Class 1 (%) | 24.52 | 26.27 | |
| Class 2 (%) | 73.40 | 71.28 | |
| Class 3/4/Unknown (%) | 2.08 | 2.45 | |
| Year | <0.0001 | ||
| 2012 (%) | 9.06 | 15.76 | |
| 2013 (%) | 34.73 | 41.27 | |
| 2014 (%) | 37.95 | 32.51 | |
| 2015 (%) | 18.26 | 10.46 | |
| Personnel | |||
| Endoscopist | - | - | <0.0001 |
| Procedure RN | - | - | <0.0001 |
| Recovery RN | - | - | <0.0001 |
| Technician | - | - | <0.0001 |
| Drugs | |||
| Diphenhydramine (mg) | 3.3/50 (25, 50) | 6.3/50 (25, 50) | <0.0001 |
| Fentanyl (mg) | 89.8/0.10 (0.10, 0.15) | 83.6/0.13 (0.10, 0.15) | 0.0001 |
| Meperidine (mg) | 11.7/75 (50, 100) | 21.8/75 (50, 100) | <0.0001 |
| Midazolam (mg) | 98.8/4.5 (4.0, 5.5) | 99.8/5.0 (4.0, 6.0) | <0.0001 |
| Ondansetron (mg) | 3.4/4.0 (4.0, 4.0) | 7.7/4.0 (4.0, 4.0) | <0.0001 |
* p values from Mann-Whitney test for continuous variables and Pearson chi-square test for categorical variables.
† Individual percentages omitted due to the large number of individuals for each category.
‡ Percentage of procedures with any use of drug / median (IQR) among procedures with nonzero use.
Fig 4Recovery time averaged by hospital staff.
Mean recovery time by hospital personnel with 95% confidence interval. Each point represents one individual or the aggregated data of individuals involved in a small number of procedures, as described in the methods section.
Multivariate regression results.
| Variable | Odds Ratio of Long Recovery | Lower (95% CI) | Upper (95% CI) | p value |
|---|---|---|---|---|
| Gender: Male vs. Female | 0.63 | 0.59 | 0.67 | <0.0001 |
| Age | 1.08 | 1.05 | 1.11 | <0.0001 |
| ASA Class: | ||||
| 2 vs. 1 | 0.98 | 0.91 | 1.05 | 0.5878 |
| 3/4/Unknown vs. 1 | 1.44 | 1.17 | 1.77 | 0.0006 |
| Year: | ||||
| 2013 vs. 2012 | 0.83 | 0.74 | 0.92 | 0.0007 |
| 2014 vs. 2012 | 0.66 | 0.59 | 0.74 | <0.0001 |
| 2015 vs. 2012 | 0.49 | 0.43 | 0.57 | <0.0001 |
| Endoscopist Quintile: | ||||
| 2nd vs. 1st | 1.28 | 1.17 | 1.40 | <0.0001 |
| 3rd vs. 1st | 1.28 | 1.16 | 1.42 | <0.0001 |
| 4th vs. 1st | 1.42 | 1.29 | 1.56 | <0.0001 |
| 5th vs. 1st | 1.56 | 1.41 | 1.72 | <0.0001 |
| Procedure RN Quintile: | ||||
| 2nd vs. 1st | 1.11 | 0.99 | 1.24 | 0.0781 |
| 3rd vs. 1st | 1.05 | 0.94 | 1.17 | 0.4294 |
| 4th vs. 1st | 1.15 | 1.04 | 1.28 | 0.0085 |
| 5th vs. 1st | 1.23 | 1.10 | 1.38 | 0.0003 |
| Recovery RN Quintile: | ||||
| 2nd vs. 1st | 1.66 | 1.47 | 1.89 | <0.0001 |
| 3rd vs. 1st | 2.13 | 1.89 | 2.41 | <0.0001 |
| 4th vs. 1st | 3.13 | 2.79 | 3.53 | <0.0001 |
| 5th vs. 1st | 5.22 | 4.64 | 5.87 | <0.0001 |
| Technician Quintile: | ||||
| 2nd vs. 1st | 1.02 | 0.88 | 1.19 | 0.7537 |
| 3rd vs. 1st | 1.11 | 0.95 | 1.30 | 0.1926 |
| 4th vs. 1st | 1.11 | 0.95 | 1.31 | 0.1778 |
| 5th vs. 1st | 1.08 | 0.94 | 1.25 | 0.2901 |
| Diphenhydramine | 1.15 | 1.11 | 1.19 | <0.0001 |
| Fentanyl | 1.16 | 1.04 | 1.29 | 0.0061 |
| Meperidine | 1.07 | 1.05 | 1.09 | <0.0001 |
| Midazolam | 1.07 | 1.03 | 1.11 | 0.0006 |
| Ondansetron | 1.18 | 1.14 | 1.21 | <0.0001 |
* Odds ratio per 10 year increase in age and increase in dosage of drugs: 10 mg for diphenhydramine and meperidine, 1 mg for midazolam and ondansetron, and 0.1 mg for fentanyl.
Predictive model results.
| Method | Training set AUC (95% CI) | Test set AUC (95% CI) |
|---|---|---|
| Neural Net | 0.747 (0.739, 0.755) | 0.723 (0.710, 0.738) |
| Logistic Regression (expanded) | 0.734 (0.725, 0.742) | 0.722 (0.708, 0.736) |
| Lasso | 0.728 (0.720, 0.736) | 0.718 (0.704, 0.733) |
| Adaptive Lasso | 0.724 (0.716, 0.732) | 0.716 (0.702, 0.730) |
| Random Forest | 1.000 (1.000, 1.000) | 0.715 (0.701, 0.730) |
| Logistic Regression | 0.703 (0.695, 0.711) | 0.697 (0.682, 0.712) |
| Decision Tree (ctree) | 0.711 (0.704, 0.720) | 0.676 (0.661, 0.691) |
| Decision Tree (rpart) | 0.642 (0.634, 0.650) | 0.640 (0.626, 0.654) |
| Support Vector Machine | 0.791 (0.783, 0.799) | 0.637 (0.620, 0.653) |
| Decision Tree (tree) | 0.610 (0.602, 0.618) | 0.617 (0.603, 0.630) |
* tree and rpart represent different implentations of standard decision trees, ctree is a conditional inference tree.