Literature DB >> 2991923

Transposable element sequences involved in the enhancement of yeast gene expression.

G S Roeder, A B Rose, R E Pearlman.   

Abstract

The his4-917 mutation of yeast results from the insertion of a Ty element, Ty917, into the 5' regulatory region of the HIS4 gene. Ty917 prevents HIS4 transcription, thus rendering the cell histidine requiring. Recombination between Ty917 and a Ty element elsewhere in the yeast genome can result in the replacement of part or all of the Ty917 element by sequences from the Ty element. Recombinant derivatives display a variety of phenotypes including His-, weakly His+, and strongly His+. In most of the His+ derivatives, the expression of HIS4 is controlled by genes at the mating type locus. To identify the Ty sequences important in controlling the expression of an adjacent gene, we used Ty elements that have different effects on gene expression to construct hybrid Ty elements in vitro. The effects of these hybrid elements on HIS4 expression were examined. These experiments indicate that the critical sequence differences between Ty elements that permit HIS4 expression and those that prevent its expression lie in the rightmost (HIS4-proximal) 730 base pairs of the element. The DNA sequence of this region was determined for three elements: Ty917, which prevents HIS4 expression; Ty917(467), which confers a weak His+ phenotype; and Ty917(480), which confers a strong His+ phenotype. Within this region, Ty917(467) differs from Ty917 by a single base-pair change that is in the internal (epsilon) region of the Ty element. Ty917(480) differs from Ty917 by this same base-pair change and by 10 changes in the terminal delta sequence. The sequence change common to Ty917(467) and Ty917(480) lies in a region of the Ty element that is homologous to the simian virus 40 enhancer of transcription.

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Year:  1985        PMID: 2991923      PMCID: PMC390582          DOI: 10.1073/pnas.82.16.5428

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  32 in total

1.  Multiple arrangements of viral DNA and an activated host oncogene in bursal lymphomas.

Authors:  G S Payne; J M Bishop; H E Varmus
Journal:  Nature       Date:  1982-01-21       Impact factor: 49.962

2.  Cloning in single-stranded bacteriophage as an aid to rapid DNA sequencing.

Authors:  F Sanger; A R Coulson; B G Barrell; A J Smith; B A Roe
Journal:  J Mol Biol       Date:  1980-10-25       Impact factor: 5.469

3.  Transposable elements associated with constitutive expression of yeast alcohol dehydrogenase II.

Authors:  V M Williamson; E T Young; M Ciriacy
Journal:  Cell       Date:  1981-02       Impact factor: 41.582

4.  DNA rearrangements associated with a transposable element in yeast.

Authors:  G S Roeder; G R Fink
Journal:  Cell       Date:  1980-08       Impact factor: 41.582

5.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

6.  Sequence variation in dispersed repetitive sequences in Saccharomyces cerevisiae.

Authors:  A J Kingsman; R L Gimlich; L Clarke; A C Chinault; J Carbon
Journal:  J Mol Biol       Date:  1981-02-05       Impact factor: 5.469

7.  Mating signals control expression of mutations resulting from insertion of a transposable repetitive element adjacent to diverse yeast genes.

Authors:  B Errede; T S Cardillo; F Sherman; E Dubois; J Deschamps; J M Wiame
Journal:  Cell       Date:  1980-11       Impact factor: 41.582

8.  The origins of gene instability in yeast.

Authors:  G S Roeder; P J Farabaugh; D T Chaleff; G R Fink
Journal:  Science       Date:  1980-09-19       Impact factor: 47.728

9.  Transformation of yeast.

Authors:  A Hinnen; J B Hicks; G R Fink
Journal:  Proc Natl Acad Sci U S A       Date:  1978-04       Impact factor: 11.205

10.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

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  48 in total

1.  Local definition of Ty1 target preference by long terminal repeats and clustered tRNA genes.

Authors:  Nurjana Bachman; Yolanda Eby; Jef D Boeke
Journal:  Genome Res       Date:  2004-06-14       Impact factor: 9.043

2.  The upstream activation site of a Ty2 element of yeast is necessary but not sufficient to promote maximal transcription of the element.

Authors:  X B Liao; J J Clare; P J Farabaugh
Journal:  Proc Natl Acad Sci U S A       Date:  1987-12       Impact factor: 11.205

3.  Cell-type-dependent gene activation by yeast transposon Ty1 involves multiple regulatory determinants.

Authors:  M Company; B Errede
Journal:  Mol Cell Biol       Date:  1987-09       Impact factor: 4.272

4.  Homology of Saccharomyces cerevisiae ADH4 to an iron-activated alcohol dehydrogenase from Zymomonas mobilis.

Authors:  V M Williamson; C E Paquin
Journal:  Mol Gen Genet       Date:  1987-09

5.  The SNF2, SNF5 and SNF6 genes are required for Ty transcription in Saccharomyces cerevisiae.

Authors:  A M Happel; M S Swanson; F Winston
Journal:  Genetics       Date:  1991-05       Impact factor: 4.562

6.  TEC1, a gene involved in the activation of Ty1 and Ty1-mediated gene expression in Saccharomyces cerevisiae: cloning and molecular analysis.

Authors:  I Laloux; E Dubois; M Dewerchin; E Jacobs
Journal:  Mol Cell Biol       Date:  1990-07       Impact factor: 4.272

7.  A region internal to the coding sequences is essential for transcription of the yeast Ty-D15 element.

Authors:  K Yu; R T Elder
Journal:  Mol Cell Biol       Date:  1989-09       Impact factor: 4.272

8.  cis-acting regulatory elements within gag genes of avian retroviruses.

Authors:  S Arrigo; M Yun; K Beemon
Journal:  Mol Cell Biol       Date:  1987-01       Impact factor: 4.272

9.  Control of yeast gene expression by transposable elements: maximum expression requires a functional Ty activator sequence and a defective Ty promoter.

Authors:  L R Coney; G S Roeder
Journal:  Mol Cell Biol       Date:  1988-10       Impact factor: 4.272

10.  An RNA polymerase I enhancer in Saccharomyces cerevisiae.

Authors:  E A Elion; J R Warner
Journal:  Mol Cell Biol       Date:  1986-06       Impact factor: 4.272

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