Literature DB >> 2991856

Are there insertions in the ribosomal DNA of vertebrates?

K Lohmann, K Kraus.   

Abstract

We have analysed the Eco RI restriction pattern of rDNA of the newt Triturus vulgaris and of some other amphibian species by Southern blotting and hybridization with nick-translated Xenopus rDNA prepared from the recombinant plasmids pXlr11 and pXlr12 (21). After hybridization with r11, the 28S coding fragments become visible in two bands, a prominent one of 5.3 kb and a weak band of 5.9 kb representing about 8% of the 28S genes. The evidence obtained so far by additional digestions with Bam HI and Bgl II indicates that in this species and in Triturus helveticus the coding regions of the 5.9 kb fragments are interrupted by an insertion 0.6 kb in length located in a 1.6 kb Bgl II fragment at the 3' end of the Eco RI fragment, which we believe to be the first described in a vertebrate.

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Year:  1985        PMID: 2991856      PMCID: PMC321855          DOI: 10.1093/nar/13.14.5145

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  27 in total

1.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

2.  Arrangement of length heterogeneity in repeating units of amplified and chromosomal ribosomal DNA from Xenopus laevis.

Authors:  P K Wellauer; R H Reeder; I B Dawid; D D Brown
Journal:  J Mol Biol       Date:  1976-08-25       Impact factor: 5.469

3.  A reinvestigation of 5' leads to 3' polarity in 40S ribosomal RNA precursor of Xenopus laevis.

Authors:  I B Dawid; P K Wellauer
Journal:  Cell       Date:  1976-07       Impact factor: 41.582

4.  Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.

Authors:  P W Rigby; M Dieckmann; C Rhodes; P Berg
Journal:  J Mol Biol       Date:  1977-06-15       Impact factor: 5.469

5.  Size of ribosomal DNA repeating units in Xenopus laevis: limited individual heterogeneity and extensive population polymorphism.

Authors:  M Buongiorno-Nardelli; F Amaldi; E Beccari; N Junakovic
Journal:  J Mol Biol       Date:  1977-02-15       Impact factor: 5.469

6.  The molecular basis for length heterogeneity in ribosomal DNA from Xenopus laevis.

Authors:  P K Wellauer; I B Dawid; D D Brown; R H Reeder
Journal:  J Mol Biol       Date:  1976-08-25       Impact factor: 5.469

7.  A novel arrangement of the 18S and 28S sequences in a repeating unit of Drosophila melanogaster rDNA.

Authors:  D M Glover; D S Hogness
Journal:  Cell       Date:  1977-02       Impact factor: 41.582

8.  A membrane-filter technique for the detection of complementary DNA.

Authors:  D T Denhardt
Journal:  Biochem Biophys Res Commun       Date:  1966-06-13       Impact factor: 3.575

9.  Introns and their flanking sequences of Bombyx mori rDNA.

Authors:  H Fujiwara; T Ogura; N Takada; N Miyajima; H Ishikawa; H Maekawa
Journal:  Nucleic Acids Res       Date:  1984-09-11       Impact factor: 16.971

10.  R loop mapping of the 18S and 28S sequences in the long and short repeating units of Drosophila melanogaster rDNA.

Authors:  R L White; D S Hogness
Journal:  Cell       Date:  1977-02       Impact factor: 41.582

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