Literature DB >> 29916170

Systemic RNA Interference in Planarians by Feeding of dsRNA Containing Bacteria.

Carolyn E Adler1, Alejandro Sánchez Alvarado2.   

Abstract

RNA interference (RNAi) is currently the only method available in planaria for assessing the function of particular genes. We describe here a method for performing body-wide gene knockdown, relying on dsRNA production in bacteria and subsequent delivery to planaria by feeding a liver-bacteria mixture. This method is ideal for screening many genes in parallel, in a cost-effective and reliable manner. We also describe a ligation-independent cloning strategy, which is used to rapidly transfer single genes into an RNAi vector that is also appropriate for downstream applications such as in situ hybridizations. Together, these protocols represent useful components of the current planarian molecular tool kit.

Keywords:  Ligation-independent cloning; Planaria; RNA interference (RNAi); Systemic RNAi

Mesh:

Substances:

Year:  2018        PMID: 29916170     DOI: 10.1007/978-1-4939-7802-1_17

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  4 in total

1.  A modular laboratory course using planarians to study genes involved in tissue regeneration.

Authors:  Stacy D Ochoa; Michael R Dores; John M Allen; Tuan Tran; Maryan Osman; Nidia P Vázquez Castellanos; JoAnn Trejo; Ricardo M Zayas
Journal:  Biochem Mol Biol Educ       Date:  2019-06-13       Impact factor: 1.160

2.  RNAi Screening to Assess Tissue Regeneration in Planarians.

Authors:  Rachel H Roberts-Galbraith
Journal:  Methods Mol Biol       Date:  2022

3.  RNAi Screen of RING/U-Box Domain Ubiquitin Ligases Identifies Critical Regulators of Tissue Regeneration in Planarians.

Authors:  John M Allen; Madison Balagtas; Elizabeth Barajas; Carolina Cano Macip; Sarai Alvarez Zepeda; Ionit Iberkleid; Elizabeth M Duncan; Ricardo M Zayas
Journal:  Front Cell Dev Biol       Date:  2022-01-19

4.  Defined diets for freshwater planarians.

Authors:  Chris Abel; Kaleigh Powers; Gargi Gurung; Jason Pellettieri
Journal:  Dev Dyn       Date:  2021-07-22       Impact factor: 2.842

  4 in total

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