| Literature DB >> 29914120 |
Mohamed El-Naggar1, Hadia Almahli2,3, Hany S Ibrahim4, Wagdy M Eldehna5, Hatem A Abdel-Aziz6.
Abstract
In our endeavor towards the development of effective anticancer agents, a novel series of pyridine-ureas 8a⁻n were synthesized. All the newly prepared derivatives were evaluated in vitro for their growth inhibitory activity towards the proliferation of breast cancer MCF-7 cell line. Compounds 8e and 8n were found to be the most active congeners against MCF-7 cells (IC50 = 0.22 and 1.88 µM after 48 h treatment; 0.11 and 0.80 µM after 72 h treatment, respectively) with increased activity compared to the reference drug doxorubicin (IC50 = 1.93 µM). Moreover, eight selected pyridines 8b, 8d, 8e, 8i, 8j and 8l⁻n were evaluated for their in vitro anticancer activity according to the US-NCI protocol. Pyridines 8b and 8e proved to be the most effective anticancer agents in the NCI assay with mean inhibition = 43 and 49%, respectively. Both 8b and 8e exhibited anti-proliferative activity against all tested cancer cell lines from all subpanels growth inhibition (GI for 8b; 12⁻78%, GI for 8e; 15⁻91%). Pyridines 8b and 8e were screened in vitro for their inhibitory activity against VEGFR-2. Both compounds inhibited VEGFR-2 at micromolar IC50 values 5.0 ± 1.91 and 3.93 ± 0.73 µM, respectively. The most active pyridines were filtered according to the Lipinski and Veber rules and all of them passed these filters. Finally, several ADME descriptors were predicted for the active pyridines through a theoretical kinetic study.Entities:
Keywords: ADME; VEGFR-2; anticancer; breast cancer; pyridine-urea; synthesis
Mesh:
Substances:
Year: 2018 PMID: 29914120 PMCID: PMC6100082 DOI: 10.3390/molecules23061459
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1Structures of some pyridine-/urea-based approved anticancer drugs (I–IV), or in clinical trials (V–XIII), and the target conjugates (4a–n and 7a–d).
Figure 2Structures of some pyridine-/urea-based anticancer agents reported by our research group (IX–XII), and the target pyridine-ureas 8a–n.
Scheme 1Synthesis of target pyridine-ureas 8a–n; Reagents and conditions: (i) DMF-DMA, xylene, reflux 7hrs; (ii) NH4OAc, AcOH, reflux 4 h; (iii) Methanol, NH2NH2·H2O, reflux 2 h; (iv) NaNO2, AcOH, stirring 2 h; (v) Xylene, reflux 1 h; (vi) Xylene, reflux 3 h.
In vitro anti-proliferative activity of pyridine-ureas 8a–n against MCF-7 breast cancer cell line.
| Compound | R | R1 | IC50 (µM) a | |
|---|---|---|---|---|
| 48 h | 72 h | |||
|
| H | H | 3.03 ± 0.22 | 2.83 ± 0.25 |
|
| H | 3-CF3 | 5.66 ± 0.45 | 5.03 ± 0.29 |
|
| H | 3-Cl | 6.40 ± 0.41 | 3.52 ± 0.11 |
|
| H | 4-Cl | 7.10 ± 0.38 | 5.14 ± 0.46 |
|
| H | 4-Cl-3-CF3 | 0.22 ± 0.02 | 0.11 ± 0.1 |
|
| H | 3-OCH3 | NA b | NA b |
|
| H | 4-OCH3 | 4.12 ± 0.27 | 27.24 ± 1.98 |
|
| OCH3 | H | NA b | NA b |
|
| OCH3 | 3-CF3 | 6.19 ± 0.54 | 5.80 ± 0.34 |
|
| OCH3 | 3-Cl | 10.9 ± 1.03 | 26.2 ± 2.17 |
|
| OCH3 | 4-Cl | 5.63 ± 0.36 | 3.45 ± 0.30 |
|
| OCH3 | 4-Cl-3-CF3 | 7.03 ± 0.61 | 21.43 ± 2.03 |
|
| OCH3 | 3-OCH3 | 23.02 ± 1.91 | 13.1 ± 1.12 |
|
| OCH3 | 4-OCH3 | 1.88 ± 0.12 | 0.80 ± 0.07 |
|
| - | - | 1.93 ± 0.15 | 1.07 ± 0.07 |
|
| - | - | 4.50 ± 0.30 | 1.71 ± 0.15 |
a IC50 values are the mean ± S.D. of three separate experiments; b NA: Compounds having IC50 value > 50 µM.
Percentage growth inhibition (GI%) of in vitro subpanel tumor cell lines at 10 μM concentration for compounds 8b, 8d, 8e, 8i, 8j and 8l–n.
| Subpanel/Cell Line | Compound a | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| 8b (NSC 793907) | 8d (NSC 793908) | 8e (NSC 793925) | 8i (NSC 793919) | 8j (NSC 793924) | 8l (NSC 793915) | 8m (NSC 793929) | 8n (NSC 793926) | ||
|
| CCRF-CEM | 58 | 19 | 71 | 50 | 32 | 45 | 11 | - |
| HL-60(TB) | 51 | 21 | 68 | 39 | 37 | 48 | 27 | 15 | |
| K-562 | 68 | 16 | 84 | 69 | 60 | 51 | 22 | 27 | |
| MOLT-4 | 67 | 28 | 76 | 61 | 58 | 57 | 35 | 15 | |
| RPMI-8226 | 78 | 10 | 91 | 66 | 49 | 57 | 26 | 17 | |
| SR | 64 | 57 | 65 | 49 | 48 | 40 | 18 | 43 | |
|
| A549/ATCC | 58 | 32 | 62 | 40 | 39 | 56 | 10 | 43 |
| EKVX | 59 | - | 51 | 34 | 17 | 33 | - | - | |
| HOP-62 | 33 | 19 | 38 | - | 23 | 23 | - | 44 | |
| HOP-92 | 32 | 19 | 73 | 45 | 40 | 30 | 19 | 27 | |
| NCI-H226 | 42 | - | 35 | 28 | - | 28 | - | 42 | |
| NCI-H23 | 53 | - | 70 | 29 | 11 | 29 | 10 | 33 | |
| NCI-H322M | 36 | 35 | 29 | - | 15 | 13 | - | 14 | |
| NCI-H460 | 52 | 36 | 70 | 39 | 17 | 48 | - | 83 | |
| NCI-H522 | 72 | 33 | 76 | 60 | 41 | 57 | 47 | 51 | |
|
| COLO 205 | 16 | - | 20 | 12 | - | - | - | - |
| HCC-2998 | 19 | - | 31 | 16 | 12 | - | - | 17 | |
| HCT-116 | 74 | 24 | 77 | 83 | 37 | 55 | 22 | 51 | |
| HCT-15 | 60 | 15 | 63 | 52 | 40 | 51 | - | - | |
| HT29 | 53 | 15 | 54 | 41 | 26 | 44 | 25 | 32 | |
| KM12 | 55 | - | 63 | 34 | 22 | 30 | - | 55 | |
| SW-620 | 19 | 23 | 33 | - | - | 10 | - | 36 | |
|
| SF-268 | 26 | - | 27 | 25 | 13 | 25 | - | 41 |
| SF-295 | 53 | - | 54 | 35 | 17 | 29 | - | - | |
| SF-539 | 20 | 16 | 19 | 23 | 11 | 13 | - | 30 | |
| SNB-19 | 33 | - | 43 | 22 | - | 22 | - | 29 | |
| SNB-75 | 23 | 16 | 27 | 34 | 16 | 20 | - | 53 | |
| U251 | 50 | 24 | 67 | 37 | 17 | 45 | - | 78 | |
|
| LOX IMVI | 53 | 15 | 36 | 30 | 20 | 22 | - | 12 |
| MALME-3M | 10 | - | 18 | - | - | 10 | - | 56 | |
| M14 | 63 | 14 | 69 | 69 | 50 | 53 | 10 | 28 | |
| MDA-MB-435 | 31 | 12 | 29 | 27 | 13 | 23 | - | 35 | |
| SK-MEL-2 | 25 | - | 38 | 27 | 16 | 13 | 13 | 21 | |
| SK-MEL-28 | 31 | 11 | 29 | 25 | 21 | 27 | - | 14 | |
| SK-MEL-5 | 59 | 13 | 45 | 42 | 32 | 37 | 16 | 78 | |
| UACC-257 | 39 | 22 | 43 | 19 | 29 | 44 | - | 45 | |
| UACC-62 | 37 | 29 | 35 | 19 | 25 | 23 | - | 41 | |
|
| IGROV1 | - | 17 | 48 | - | - | 17 | - | 23 |
| OVCAR-3 | 59 | - | 73 | 31 | 10 | 43 | - | - | |
| OVCAR-4 | 58 | 26 | 55 | 41 | - | 25 | - | 71 | |
| OVCAR-5 | 17 | - | 11 | - | 12 | 15 | - | - | |
| OVCAR-8 | 39 | - | 43 | 19 | 10 | 19 | - | 53 | |
| NCI/ADR-RES | 47 | - | 51 | 34 | 16 | 31 | - | 16 | |
| SK-OV-3 | 18 | 18 | 32 | - | 17 | 16 | - | 26 | |
|
| 786-0 | 23 | 10 | 44 | 31 | 29 | 25 | - | 89 |
| A498 | 48 | 21 | 43 | 39 | 31 | 43 | 15 | 29 | |
| RXF 393 | 15 | - | 19 | 23 | 18 | 28 | - | 42 | |
| SN12C | 33 | - | 43 | 21 | 14 | 22 | - | 36 | |
| TK-10 | 24 | - | 35 | 21 | - | 12 | - | 40 | |
| UO-31 | 45 | 11 | 61 | 26 | 21 | 28 | 20 | 19 | |
|
| PC-3 | 76 | 24 | 86 | 73 | 61 | 67 | 41 | 19 |
| DU-145 | 32 | - | 46 | 18 | - | 20 | - | 28 | |
|
| MCF7 | 59 | 26 | 64 | 38 | 25 | 42 | 10 | 35 |
| MDA-MB-231 | 32 | - | 15 | 31 | 13 | 12 | - | 60 | |
| HS 578T | 12 | - | 24 | 26 | - | 19 | - | 61 | |
| BT-549 | 34 | - | 34 | 29 | - | 12 | 13 | 50 | |
| T-47D | 74 | 28 | 79 | 47 | 51 | 51 | 19 | 40 | |
| MDA-MB-468 | 73 | - | 62 | 51 | 29 | 52 | - | 17 | |
a Only GI% higher than 10% are shown.
Figure 3Mean % growth inhibitions of the tested pyridines over NCI 58 cell line panel.
Figure 4(A) The most sensitive cell lines towards the target pyridines 8b, 8d, 8e and 8i according to the GI%; (B) the most sensitive cell lines towards the target pyridines 8j, 8l, 8m and 8n according to the GI%.
Cytotoxic activity of compounds 8b and 8e against non-tumorigenic human lung fibroblast WI-38 cell line.
| Compound | IC50 (μM) a |
|---|---|
| WI-38 | |
|
| 91.5 ± 4.53 |
|
| 83.14 ± 5.21 |
IC50 values are the mean ± S.D. of three separate experiments.
IC50 values for the inhibitory activity of pyridine-urea 8e and 8n against VEGFR-2.
| Compound | IC50 (μM) a |
|---|---|
| VEGFR-2 | |
|
| 5.00 ± 1.91 |
|
| 3.93 ± 0.73 |
|
| 0.09 ± 0.01 |
a IC50 values are the mean ± S.D. of three separate experiments.
ADME studies results for all the synthesized compounds.
| Compound | ADMET Solubility 1 | ADMET Solubility Level 2 | ADMET Absorption Level 3 | ADMET BBB 4 | ADMET BBB Level 4 |
|---|---|---|---|---|---|
|
| −4.499 | 2 | 0 | −0.045 | 2 |
|
| −5.93 | 2 | 0 | 0.247 | 1 |
|
| −6.698 | 1 | 0 | 0.452 | 1 |
|
| −4.554 | 2 | 0 | −0.191 | 2 |
|
| −5.971 | 2 | 0 | 0.10 | 1 |
|
| −6.723 | 1 | 0 | 0.306 | 1 |
|
| −4.623 | 2 | 0 | −0.337 | 2 |
1 The base 10 logarithm of the molar solubility as predicted by the regression model based by DS; 2 Categorical solubility level. (0 = extreme low, 1 = very low but possible, 2 = low, 3 = good, 4 = optimal); 3 Human intestinal absorption level. (0 = good, 1 = moderate, 2 = poor, 3 = very poor); 4 Blood brain barrier penetration. (0; ≥0.7 = very high penetrant, 1; 0 ≤ log BB < 0.7 = High penetrant, 2; −0.52 < LogBB < 0 = low, 3; logBB ≤ −0.52 = low, 4; NA = undefined).
Lipinski rule of five parameters results for all the synthesized compounds.
| Compound | H-Bond Donor 1,* | H-Bond Acceptor 2,* | Molecular Weight 3 | ALogP 4 | No. of Rotatable Bond 5 | Polar Surface Area 6 (Å2) |
|---|---|---|---|---|---|---|
|
| 2 | 3 | 333.38 | 3.585 | 4 | 63.25 |
|
| 2 | 3 | 401.38 | 4.527 | 5 | 63.25 |
|
| 2 | 3 | 435.82 | 5.192 | 5 | 63.25 |
|
| 2 | 4 | 363.41 | 3.569 | 5 | 72.48 |
|
| 2 | 4 | 431.41 | 4.511 | 6 | 72.48 |
|
| 2 | 4 | 465.85 | 5.175 | 6 | 72.48 |
|
| 2 | 5 | 393.44 | 3.552 | 6 | 81.71 |
1 The upper limit of the number of hydrogen bond donors is 5; 2 the upper limit of the number of hydrogen bond acceptors is 10; 3 the upper limit of the molecular weight is 500; 4 the upper limit of the AlogP (the log value of octanol-water partition coefficient) is 500; 5 the upper limit of the number of rotatable bonds is 10; 6 the upper limit of the polar surface area is 140 Å2; * the upper limit of the sum of the hydrogen bond donors and acceptors is 12.