| Literature DB >> 29911073 |
Zhihui Chang1, Hairui Wang1, Beibei Li1, Zhaoyu Liu1, Jiahe Zheng1.
Abstract
Purpose: To explore the metabolic characterization of host responses to drainage-resistant Klebsiella pneumoniae liver abscesses (DRKPLAs) with serum 1H-nuclear magnetic resonance (NMR) spectroscopy. Materials andEntities:
Keywords: 1H-nuclear magnetic resonance spectroscopy; Klebsiella pneumoniae; drainage-resistant; liver abscess; metabolite
Mesh:
Substances:
Year: 2018 PMID: 29911073 PMCID: PMC5992471 DOI: 10.3389/fcimb.2018.00174
Source DB: PubMed Journal: Front Cell Infect Microbiol ISSN: 2235-2988 Impact factor: 5.293
Figure 1CT images of the livers of K. pneumoniae liver abscess patients before and 1 week after drainage. A 36-year-old man with a K. pneumoniae liver abscess (A). The diameter of the abscess did not decrease 1 week after drainage (B), and the abscess was thus defined as a drainage-resistant K. pneumoniae liver abscess (DRKPLA). A 62-year-old woman with a K. pneumoniae liver abscess (C). The abscess had almost disappeared 1 week after drainage (D) and was thus defined as a drainage-sensitive K. pneumoniae liver abscess (DSKPLA).
Figure 2Flow chart of the patient selection.
Clinical and CT Characteristic in 86 patients with KPLA underwent drainage.
| Age (years) | 52.44 ± 11.71 | 55.83 ± 10.97 | 0.12 |
| Sex (male) | 14 (70.0) | 53 (80.3) | 0.21 |
| Diabetes mellitus | 14 (70.0) | 34 (51.5) | 0.03 |
| Cryptogenic | 5 (25.0) | 17 (25.7) | 0.26 |
| Biliary tract disease | 1 (5.0) | 6 (9.1) | 0.32 |
| Fever (≥38°C) | 19 (95.0) | 60 (90.9) | 0.68 |
| Abdominal pain/discomfort | 17 (85.0) | 51 (77.2) | 0.43 |
| Gastrointestinal symptoms | 4 (20.0) | 18 (27.3) | 0.11 |
| White blood cells (× 109/L) | 16.03 ± 5.59 | 14.56 ± 6.69 | 0.31 |
| CRP (mg/L) | 183.91 ± 143.74 | 225.47 ± 81.65 | 0.51 |
| ALT | 121.85 ± 74.69 | 90.60 ± 51.97 | 0.09 |
| Total bilirubin | 28.25 ± 13.20 | 30.94 ± 14.48 | 0.19 |
| Septic Shock | 2 (10.0) | 5 (7.6) | 0.30 |
| Days of hospitalization | 21.76 ± 12.38 | 8.04 ± 4.63 | < 0.01 |
| Maximal abscess diameter(mm) | 62.87 ± 29.77 | 69.67 ± 34.58 | 0.06 |
| Single | 16 (80.0) | 44 (66.7) | 0.10 |
| Solid | 19 (95.0) | 37 (56.1) | 0.02 |
| Multilocular | 16 (80.0) | 38 (57.6) | 0.04 |
| Gas formation | 1 (5.0) | 14 (21.2) | < 0.01 |
| Hypermucoviscosity phenotype | 17 (85.0) | 31 (46.9) | 0.01 |
Data are presented as median (mean ± standard deviation) or n (%). DRKPLA, drainage-resistant Klebsiella pneumoniae liver abscess; DSKPLA, drainage-sensitive Klebsiella pneumoniae liver abscesses.*DRKPLA vs. DSKPLA.
Analysis of peripheral blood lymphocyte subsets in seven patients.
Data are presented as median (mean ± standard deviation). DRKPLA, drainage-resistant Klebsiella pneumoniae liver abscess; DSKPLA, drainage-sensitive Klebsiella pneumoniae liver abscesses.*DRKPLA vs. DSKPLA.
Characteristics of the serum sample population.
| Age (years) | 52.44 ± 11.71 | 54.63 ± 11.29 | 0.15 |
| Sex (male) | 14 (70.0) | 15 (75.0) | 0.28 |
| BMI | 23.49 ± 2.49 | 22.3 ± 2.17 | 0.36 |
| Diabetes mellitus | 14 (70.0) | 9 (45.0) | 0.01 |
| Hypertension | 5 (25.0) | 4 (20.0) | 0.62 |
| Hyperlipemia | 6 (30.0) | 7 (35.0) | 0.52 |
| Liver cirrhosis | 1 (0.025) | 0 | 0.29 |
Data are presented as median (mean ± standard deviation) or n (%). DRKPLA, drainage-resistant Klebsiella pneumoniae liver abscess; DSKPLA, drainage-sensitive Klebsiella pneumoniae liver abscesses.*DRKPLA vs. DSKPLA.
Figure 3Representative 599.83 MHz 1HNMR spectra of serum samples from a DSKPLA and a DRKPLA patient. The key metabolites are noted.
Figure 4PLS-DA analyses of the DRKPLAs and the DSKPLAs serum samples. (A) Two-dimensional PLS-DA score plot. (B) PLS-DA classification using different numbers of components. The red asterisk indicates the best classifier. The inset table summarizes the Q2, R2 and accuracy of the best model. (C) Important features identified by the VIP scores. The variable importance in projection score is a weighted sum of squares of the PLS-DA loadings that accounts for the amount of explained Y-variation in each dimension. (D) Permutation test statistics for 1,000 permutations with the observed statistic at p < 0.01.
Figure 5Boxplot of the relative concentrations of the significantly altered metabolites (p < 0.05) in the sera of DRKPLA (green) and DSKPLA (red) patients. The bar plots show the normalized values (the mean ± one standard deviation). The boxes range from the 25% to the 75% percentiles, and the 5% and 95% percentiles are indicated as error bars. Single data points are indicated by circles. The medians are indicated by the horizontal lines within each box.
Figure 6Metabolic pathway analysis of the key metabolites present in the serum samples. The pathways named in the figure had impact values >0.15 and –log(p) values >10.
Pathway analysis of key metabolites.
| Alanine, aspartate and glutamate metabolism | 2 | 1.53E-06 | 13.392 | 7.49E-05 | 0.35294 |
| D-Glutamine and D-glutamate metabolism | 4 | 4.89E-06 | 12.228 | 8.61E-05 | 0.47199 |
| Arginine and proline metabolism | 8 | 3.46E-05 | 10.271 | 3.39E-04 | 0.17075 |
| Butanoate metabolism | 4 | 0.003915 | 5.543 | 0.011989 | 0.148 |
| Purine metabolism | 3 | 3.31E-05 | 10.317 | 3.39E-04 | 0.00794 |
| Nitrogen metabolism | 6 | 5.27E-06 | 12.154 | 8.61E-05 | 6.70E-04 |
| Aminoacyl-tRNA biosynthesis | 10 | 1.92E-04 | 8.5565 | 0.001178 | 0.11268 |
| Glyoxylate and dicarboxylate metabolism | 4 | 3.41E-04 | 7.9839 | 0.001856 | 0.14685 |
| Citrate cycle (TCA cycle) | 3 | 0.001201 | 6.725 | 0.005883 | 0.005883 |
| Fructose and mannose metabolism | 1 | 0.001404 | 6.5682 | 0.006256 | 0.02948 |
| Methane metabolism | 5 | 0.002181 | 6.128 | 0.008475 | 0.16439 |
| Synthesis and degradation of ketone bodies | 3 | 0.003696 | 5.6006 | 0.011989 | 0.7 |
| Tyrosine metabolism | 4 | 0.004791 | 5.341 | 0.01381 | 0.01381 |
| Glycine, serine, and threonine metabolism | 7 | 0.005242 | 5.2511 | 0.014269 | 0.30843 |
| Valine, leucine, and isoleucine degradation | 5 | 0.009874 | 4.6178 | 0.025465 | 0.0835 |
| Glycolysis or Gluconeogenesis | 5 | 0.011955 | 4.4266 | 0.028519 | 0.09576 |
| Galactose metabolism | 3 | 0.013393 | 4.313 | 0.028519 | 0.00276 |
| Starch and sucrose metabolism | 1 | 0.013969 | 4.2709 | 0.028519 | 0.01703 |
| Primary bile acid biosynthesis | 1 | 0.015259 | 4.1826 | 0.029381 | 0.00822 |
| Glutathione metabolism | 2 | 0.01619 | 4.1234 | 0.029381 | 0.00762 |
| Vitamin B6 metabolism | 2 | 0.020978 | 3.8643 | 0.036712 | 0.02712 |
| Cysteine and methionine metabolism | 2 | 0.023407 | 3.7547 | 0.037672 | 0.01649 |
| Propanoate metabolism | 6 | 0.023833 | 3.7367 | 0.037672 | 0.04451 |
| Lysine degradation | 3 | 0.032891 | 3.4146 | 0.048838 | 0.14675 |
| Inositol phosphate metabolism | 1 | 0.070177 | 2.6567 | 0.10114 | 0.13703 |
| Lysine biosynthesis | 2 | 0.076268 | 0.076268 | 0.10677 | 0.09993 |
| Pyruvate metabolism | 4 | 0.094084 | 2.3636 | 0.12806 | 0.41957 |
| Ascorbate and aldarate metabolism | 3 | 0.12483 | 2.0808 | 0.16097 | 0.13047 |
| Phenylalanine metabolism | 4 | 0.14801 | 1.9105 | 0.18131 | 0.11906 |
| Valine, leucine, and isoleucine biosynthesis | 5 | 0.18881 | 1.667 | 0.22565 | 0.07367 |
| Glycerophospholipid metabolism | 2 | 0.22803 | 1.4783 | 0.26604 | 0.06691 |
| Taurine and hypotaurine metabolism | 2 | 0.36489 | 1.0082 | 0.39733 | 0.02158 |
| Selenoamino acid metabolism | 1 | 0.57638 | 0.55098 | 0.58839 | 0.00321 |
Hits, the number of compounds that match with our experimental data;
FDR, False Discovery Rate;
Impact, pathway impact value calculated from pathway topology analysis.