Literature DB >> 29910149

Esrrb Unlocks Silenced Enhancers for Reprogramming to Naive Pluripotency.

Kenjiro Adachi1, Wolfgang Kopp2, Guangming Wu1, Sandra Heising1, Boris Greber3, Martin Stehling4, Marcos J Araúzo-Bravo5, Stefan T Boerno6, Bernd Timmermann6, Martin Vingron2, Hans R Schöler7.   

Abstract

Transcription factor (TF)-mediated reprogramming to pluripotency is a slow and inefficient process, because most pluripotency TFs fail to access relevant target sites in a refractory chromatin environment. It is still unclear how TFs actually orchestrate the opening of repressive chromatin during the long latency period of reprogramming. Here, we show that the orphan nuclear receptor Esrrb plays a pioneering role in recruiting the core pluripotency factors Oct4, Sox2, and Nanog to inactive enhancers in closed chromatin during the reprogramming of epiblast stem cells. Esrrb binds to silenced enhancers containing stable nucleosomes and hypermethylated DNA, which are inaccessible to the core factors. Esrrb binding is accompanied by local loss of DNA methylation, LIF-dependent engagement of p300, and nucleosome displacement, leading to the recruitment of core factors within approximately 2 days. These results suggest that TFs can drive rapid remodeling of the local chromatin structure, highlighting the remarkable plasticity of stable epigenetic information.
Copyright © 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  DNA methylation; nucleosome; pioneer factor; pluripotency; reprogramming; silenced enhancer; transcription factor

Mesh:

Substances:

Year:  2018        PMID: 29910149     DOI: 10.1016/j.stem.2018.05.020

Source DB:  PubMed          Journal:  Cell Stem Cell        ISSN: 1875-9777            Impact factor:   24.633


  25 in total

Review 1.  Chromatin accessibility dynamics during cell fate reprogramming.

Authors:  Dongwei Li; Xiaodong Shu; Ping Zhu; Duanqing Pei
Journal:  EMBO Rep       Date:  2021-01-22       Impact factor: 8.807

Review 2.  Pioneer Transcription Factors Initiating Gene Network Changes.

Authors:  Kenneth S Zaret
Journal:  Annu Rev Genet       Date:  2020-09-04       Impact factor: 16.830

3.  OCT4 interprets and enhances nucleosome flexibility.

Authors:  Caitlin M MacCarthy; Jan Huertas; Claudia Ortmeier; Hermann Vom Bruch; Daisylyn Senna Tan; Deike Reinke; Astrid Sander; Tim Bergbrede; Ralf Jauch; Hans R Schöler; Vlad Cojocaru
Journal:  Nucleic Acids Res       Date:  2022-10-14       Impact factor: 19.160

Review 4.  Transcriptional control of energy metabolism by nuclear receptors.

Authors:  Charlotte Scholtes; Vincent Giguère
Journal:  Nat Rev Mol Cell Biol       Date:  2022-05-16       Impact factor: 113.915

5.  Cnot8 eliminates naïve regulation networks and is essential for naïve-to-formative pluripotency transition.

Authors:  Yujun Quan; Meijiao Wang; Chengpeng Xu; Xiaoxiao Wang; Yu Wu; Dandan Qin; Yuxuan Lin; Xukun Lu; Falong Lu; Lei Li
Journal:  Nucleic Acids Res       Date:  2022-05-06       Impact factor: 19.160

6.  BMP4 resets mouse epiblast stem cells to naive pluripotency through ZBTB7A/B-mediated chromatin remodelling.

Authors:  Shengyong Yu; Chunhua Zhou; Shangtao Cao; Jiangping He; Baomei Cai; Kaixin Wu; Yue Qin; Xingnan Huang; Lizhan Xiao; Jing Ye; Shuyang Xu; Wenxiu Xie; Junqi Kuang; Shilong Chu; Jing Guo; He Liu; Wei Pang; Lin Guo; Mengying Zeng; Xiaoshan Wang; Rongping Luo; Chen Li; Guoqing Zhao; Bo Wang; Linlin Wu; Jiekai Chen; Jing Liu; Duanqing Pei
Journal:  Nat Cell Biol       Date:  2020-05-11       Impact factor: 28.824

Review 7.  Direct cell reprogramming: approaches, mechanisms and progress.

Authors:  Haofei Wang; Yuchen Yang; Jiandong Liu; Li Qian
Journal:  Nat Rev Mol Cell Biol       Date:  2021-02-22       Impact factor: 113.915

8.  Nucleosomal DNA Dynamics Mediate Oct4 Pioneer Factor Binding.

Authors:  Jan Huertas; Caitlin M MacCarthy; Hans R Schöler; Vlad Cojocaru
Journal:  Biophys J       Date:  2020-01-16       Impact factor: 4.033

9.  Protection from DNA re-methylation by transcription factors in primordial germ cells and pre-implantation embryos can explain trans-generational epigenetic inheritance.

Authors:  Isaac Kremsky; Victor G Corces
Journal:  Genome Biol       Date:  2020-05-18       Impact factor: 13.583

10.  ESRRB regulates glucocorticoid gene expression in mice and patients with acute lymphoblastic leukemia.

Authors:  Kayleigh M Gallagher; Justine E Roderick; Shi Hao Tan; Tze King Tan; Leonard Murphy; Jun Yu; Rui Li; Kevin W O'Connor; Julie Zhu; Michael R Green; Takaomi Sanda; Michelle A Kelliher
Journal:  Blood Adv       Date:  2020-07-14
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.