Literature DB >> 2989822

Hepatitis B virus integration in hepatocellular carcinoma DNA: duplication of cellular flanking sequences at the integration site.

K Yaginuma, M Kobayashi, E Yoshida, K Koike.   

Abstract

The integrated form of hepatitis B virus (HBV) in the human hepatoma cell line huH2-2 and its cellular counterpart sequence have been cloned and analyzed. Blot hybridization analysis and nucleotide sequencing indicated that a single copy of the 1895-base-pair (bp) subgenomic region of HBV DNA, spanning from the middle of pre-S to the end of gene X, was integrated and flanked by the 12-bp directly repeating cellular sequences. A comparison of the sequencing data with that of the cellular counterpart DNA indicated the absence of deletion and rearrangement in the cellular flanking DNA following integration of the 1895-bp HBV DNA, except for generation of the 12-bp direct repeat at the virus-cell junction. A possible model for the mechanism of HBV integration is proposed.

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Year:  1985        PMID: 2989822      PMCID: PMC391120          DOI: 10.1073/pnas.82.13.4458

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

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Authors:  W Szmuness
Journal:  Prog Med Virol       Date:  1978

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Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

3.  In vitro packaging of lambda Dam vectors and their use in cloning DNA fragments.

Authors:  L Enquist; N Sternberg
Journal:  Methods Enzymol       Date:  1979       Impact factor: 1.600

4.  Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.

Authors:  P W Rigby; M Dieckmann; C Rhodes; P Berg
Journal:  J Mol Biol       Date:  1977-06-15       Impact factor: 5.469

5.  Screening lambdagt recombinant clones by hybridization to single plaques in situ.

Authors:  W D Benton; R W Davis
Journal:  Science       Date:  1977-04-08       Impact factor: 47.728

6.  Production of HBs-antigen by two new human hepatoma cell lines and its enhancement by dexamethasone.

Authors:  N Huh; T Utakoji
Journal:  Gan       Date:  1981-02

7.  Identification of integrated hepatitis B virus DNA and expression of viral RNA in an HBsAg-producing human hepatocellular carcinoma cell line.

Authors:  P R Chakraborty; N Ruiz-Opazo; D Shouval; D A Shafritz
Journal:  Nature       Date:  1980-07-31       Impact factor: 49.962

8.  Processed genes: a dispersed human immunoglobulin gene bearing evidence of RNA-type processing.

Authors:  G F Hollis; P A Hieter; O W McBride; D Swan; P Leder
Journal:  Nature       Date:  1982-03-25       Impact factor: 49.962

9.  Evidence that a human beta-tubulin pseudogene is derived from its corresponding mRNA.

Authors:  C D Wilde; C E Crowther; T P Cripe; M Gwo-Shu Lee; N J Cowan
Journal:  Nature       Date:  1982-05-06       Impact factor: 49.962

10.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

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  34 in total

1.  The cloning of 3'-truncated preS/S gene from HBV genomic DNA and its expression in transgenic mice.

Authors:  Yi-Ping Hu; Yu-Cheng Yao; Jian-Xiu Li; Xin-Min Wang; Hong Li; Zhong-Hua Wang; Zhang-Heng Lei
Journal:  World J Gastroenterol       Date:  2000-10       Impact factor: 5.742

2.  Tight clustering of human hepatitis B virus integration sites in hepatomas near a triple-stranded region.

Authors:  C Shih; K Burke; M J Chou; J B Zeldis; C S Yang; C S Lee; K J Isselbacher; J R Wands; H M Goodman
Journal:  J Virol       Date:  1987-11       Impact factor: 5.103

3.  Rearrangement of a common cellular DNA domain on chromosome 4 in human primary liver tumors.

Authors:  C Pasquinelli; F Garreau; L Bougueleret; E Cariani; K H Grzeschik; V Thiers; O Croissant; M Hadchouel; P Tiollais; C Bréchot
Journal:  J Virol       Date:  1988-02       Impact factor: 5.103

4.  Chromosomal translocation and inverted duplication associated with integrated hepatitis B virus in hepatocellular carcinomas.

Authors:  T Tokino; S Fukushige; T Nakamura; T Nagaya; T Murotsu; K Shiga; N Aoki; K Matsubara
Journal:  J Virol       Date:  1987-12       Impact factor: 5.103

5.  Subgenomic studies on hepatitis B virus DNA integrated into the genome of hepatocellular carcinoma.

Authors:  K Togawa; T Arima; H Nagashima
Journal:  Gastroenterol Jpn       Date:  1987-10

6.  Integrated structures of duck hepatitis B virus DNA in hepatocellular carcinoma.

Authors:  F Imazeki; K Yaginuma; M Omata; K Okuda; M Kobayashi; K Koike
Journal:  J Virol       Date:  1988-03       Impact factor: 5.103

7.  Topoisomerase I-mediated integration of hepadnavirus DNA in vitro.

Authors:  H P Wang; C E Rogler
Journal:  J Virol       Date:  1991-05       Impact factor: 5.103

8.  Integrated structures of HBV DNA in chronic hepatitis and hepatoma tissues.

Authors:  S Takada; Y Gotoh; S Hayashi; M Kobayashi; K Koike
Journal:  Gastroenterol Jpn       Date:  1990-09

9.  Identification of a promoter region for 3.6-kilobase mRNA of hepatitis B virus and specific cellular binding protein.

Authors:  K Yaginuma; K Koike
Journal:  J Virol       Date:  1989-07       Impact factor: 5.103

10.  Integration of hepatitis B virus DNA in chromosome-specific satellite sequences.

Authors:  Y Shaul; P D Garcia; S Schonberg; W J Rutter
Journal:  J Virol       Date:  1986-09       Impact factor: 5.103

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