Literature DB >> 29893962

The Increasing Disconnection of Primary Biodiversity Data from Specimens: How Does It Happen and How to Handle It?

Julien Troudet1, Régine Vignes-Lebbe1, Philippe Grandcolas1, Frédéric Legendre1.   

Abstract

Primary biodiversity data represent the fundamental elements of any study in systematics and evolution. They are, however, no longer gathered as they used to be and the mass-production of observation-based (OB) occurrences is overthrowing the collection of specimen-based (SB) occurrences. Although this change in practice is a major upheaval with significant consequences in the study of biodiversity, it remains understudied and has not attracted yet the attention it deserves. Analyzing 536 million occurrences from the Global Biodiversity Information Facility (GBIF) mediated data, we show that this spectacular change affects the 24 eukaryote taxonomic classes we targeted: from 1970 to 2016 the proportion of occurrences marked as traceable to tangible material (i.e., SB occurrences) fell from 68% to 18%; moreover, most of those specimen based-occurrences cannot be readily traced back to a specimen because the necessary information is missing. Ethical, practical or legal reasons responsible for this shift are known, and this situation appears unlikely to be reversed. Still, we urge scholars to acknowledge this dramatic change, embrace it and actively deal with it. Specifically, we emphasize why SB occurrences must be gathered, as a warrant to allow both repeating evolutionary studies and conducting rich and diverse investigations. When impossible to secure, voucher specimens must be replaced with OB occurrences combined with ancillary data (e.g., pictures, recordings, samples, DNA sequences). Ancillary data are instrumental for the usefulness of biodiversity occurrences and we show that, despite improving technologies to collate them, they remain rarely shared. The consequences of such a change are not yet clear but we advocate collecting material evidence or ancillary data to ensure that primary biodiversity data collected lately do not partly become obsolete when doubtful.

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Year:  2018        PMID: 29893962     DOI: 10.1093/sysbio/syy044

Source DB:  PubMed          Journal:  Syst Biol        ISSN: 1063-5157            Impact factor:   15.683


  11 in total

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4.  Mapping Africa's Biodiversity: More of the Same Is Just Not Good Enough.

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9.  Data integration enables global biodiversity synthesis.

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10.  How FAIR are plant sciences in the twenty-first century? The pressing need for reproducibility in plant ecology and evolution.

Authors:  Saúl Manzano; Adele C M Julier
Journal:  Proc Biol Sci       Date:  2021-02-10       Impact factor: 5.349

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